Can you please run

  grep -r 'compare-version.*>' /var/lib/dpkg/info/

and copy&paste the output here? There is no hit on my current wily
system, but perhaps you have some "weird" initramfs-tools version?

** Package changed: systemd (Ubuntu) => initramfs-tools (Ubuntu)

** Summary changed:

- [systemd 223-1] dpkg: warning: --compare-versions used with obsolete relation 
operator '>'
+ dpkg: warning: --compare-versions used with obsolete relation operator '>'

** Changed in: initramfs-tools (Ubuntu)
   Importance: High => Low

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https://bugs.launchpad.net/bugs/1480122

Title:
  dpkg: warning: --compare-versions used with obsolete relation operator
  '>'

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