It's more a workaround than a solution for me but this seems to work:
gconftool-2 -s /apps/panel/global/locked_down --type=bool true
if you want to change something you have to set it back to false.

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GNOME Panel icons (on right side) move apparently randomly on session start in 
some situations
https://bugs.launchpad.net/bugs/44082
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