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My system is using NVidia's separate X-screen instead of TwinView. If I
click Places->Home Folder in the 2nd screen it opens in the first
screen. This is 100% reproducible.

Same behaviour observed if running
DISPLAY=:0.1 nautilus --browser
or if running from Alt-F2

However, for gnome-terminal, running from the menus opens it in the wrong 
(first) screen, but running
DISPLAY=:0.1 gnome-terminal
or running from Alt-F2 opens it in the correct (2nd) screen.

Firefox/thunderbird open properly in the 2nd screen in all cases.
Compiz-config settings manager has same behaviour as gnome-terminal.
Problem seems to be non-app specific.

http://ubuntuforums.org/showthread.php?t=1089578 shows another user with
the same problem. May be linked to the binary nvidia, am unable to test
without since I'm not aware of any way to get separate X with nv or
mesa.

[lspci]
00:00.0 Host bridge [0600]: Intel Corporation Mobile PM965/GM965/GL960 Memory 
Controller Hub [8086:2a00] (rev 03)
        Subsystem: ASUSTeK Computer Inc. Device [1043:1517]
01:00.0 VGA compatible controller [0300]: nVidia Corporation GeForce 9300M G 
[10de:042e] (rev a1)
        Subsystem: ASUSTeK Computer Inc. Device [1043:17c2]

** Affects: gnome-desktop (Ubuntu)
     Importance: Undecided
         Status: Confirmed


** Tags: needs-lspci-vvnn needs-xorglog separate x-screen
-- 
Separate X-screen, apps launched from 2nd screen appear on first screen
https://bugs.launchpad.net/bugs/339783
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