In the gstreamer-bugzilla for gst-plugins-bad 0.10.3 are some nasty issues 
discussed regarding faad ABI-incompatibilities 
http://bugzilla.gnome.org/show_bug.cgi?id=340762 for faad-CVS and last stable 
faad-release. I have the feeling this is not directly gstreamer- or 
totem-related at all. It would also explain why I have these faad-issues with 
gst-launch-0.10 and totem, but not with mplayer on my machine. Afaik mplayer 
uses compiled-in faad where as gstreamer uses a different (shared) 
library-version of faad. My installed faad-library is
2.0.0+cvs20040908+mp4v2+bmp-0ubuntu3. I don't know how to check which faad 
version is compiled into my mplayer (0.99+1.0pre7try2+cvs20060117-0ubuntu6). 
For sure is that mplayer doesn't use the shared library installed on my box. 
"ldd /usr/bin/mplayer | grep -i faad" did no produce any results. I hope this 
info helps a bit.

-- 
totem-gstreamer doesn't play Apple QuickTime movie (fast start)
https://launchpad.net/bugs/3236

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