I had this problem also on 8.10.  I copied wordlist.db from /var/cache
/dictionaries-common/ to /home/username/.bogofilter based on the error
but it still failed.  I removed the file and then marked a message as
spam and then not spam and the wordlist.db was created and I have not
seen the error again.

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bogofilter error messages in evolution
https://bugs.launchpad.net/bugs/282734
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