Package: wnpp Severity: wishlist Owner: Andreas Tille <[EMAIL PROTECTED]>
* Package name : ssake Version : 3.2.1 Upstream Author : Rene Warren <rwarrens * bcgsc.ca> * URL : http://www.bcgsc.ca/platform/bioinfo/software/ssake * License : GPL 2+ Programming Lang: Perl Description : assembling millions of very short DNA sequences SSAKE is a genomics application for assembling millions of very short DNA sequences. . The Short Sequence Assembly by K-mer search and 3' read Extension (SSAKE) is a genomics application for aggressively assembling millions of short nucleotide sequences by progressively searching for perfect 3'-most k-mers using a DNA prefix tree. SSAKE is designed to help leverage the information from short sequences reads by stringently clustering them into contigs that can be used to characterize novel sequencing targets. Preliminary packaging stuff can be found at Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/ssake/trunk/ -- System Information: Debian Release: lenny/sid APT prefers testing APT policy: (501, 'testing'), (50, 'unstable'), (5, 'experimental') Architecture: i386 (i686) -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
