Package: wnpp Severity: wishlist Owner: Charles Plessy <[EMAIL PROTECTED]>
Package name : treevolve Version : 1.3.2 Upstream Author : Andrew Rambaut & Nick Grassly URL : http://evolve.zoo.ox.ac.uk/software.html?id=Treevolve License : Not found... will enquire. Programming Lang: C Description : simulation of evolution of DNA sequences treevolve will simulate the evolution of DNA sequences under a coalescent model, which allows exponential population growth, population subdivision according to an island model, migration and recombination. In addition different periods of population dynamics can be enforced at different times. For example, a period of exponential growth can be followed by a period of stasis where the population is subdivided into demes. Multiple sets of such simulated sequence data can then be compared to sequence data sampled from a population of interest using suitable statistics, and various evolutionary hypotheses concerning the evolution of this population tested. . Citation: Population dynamics of HIV-1 inferred from gene sequences Grassly NC, Harvey PH & Holmes EC (1999) Genetics 151, 427-438. The package is already ready: it was prepared by Vincent Danjean, who offered it to the Debian-Med packaging team. http://www-id.imag.fr/Laboratoire/Membres/Danjean_Vincent/deb.html#treevolve Have a nice day, -- Charles Plessy -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
