Package: wnpp Severity: wishlist * Package name : cluster3 Version : 1.27 Upstream Author : M. J. L. de Hoon <[EMAIL PROTECTED]>, S. Imoto, J. Nolan, and S. Miyano * URL : http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/software/cluster/ * License : non-free Description : [Biology] Reimplementation of the Eisen-clustering software
The clustering software by Michael Eisen is well known and accepted in the Bioinfromatics community. This package represents a reimplementation and extension of the Windows program. . This software implements clustering routines that can be used to analyze gene expression data. Routines for hierarchical (pairwise simple, complete, average, and centroid linkage) clustering, k-means and k-medians clustering, and 2D self-organizing maps are included. The routines are available in the form of a C clustering library, an extension module to Python, a module to Perl, as well as an enhanced version of Cluster, which was originally developed by Michael Eisen of Berkeley Lab. The C clustering library and the associated extension module for Python was released under the Python license. The Perl module was released under the Artistic License. Cluster 3.0 is covered by the original Cluster/TreeView license. . This package contains the command line and motif gui versions of Cluster 3.0. . Homepage: http://bonsai.ims.u-tokyo.ac.jp/~mdehoon/software/cluster/ An inital effort to provide a package is available from http://bioinformatics.pzr.uni-rostock.de/~moeller/debian/cluster3 -- System Information: Debian Release: 3.1 APT prefers testing APT policy: (500, 'testing') Architecture: i386 (i686) Kernel: Linux 2.6.9
