Hi Steffen, I had a look into MOFA2 and realised you have just issued the needed ITPs. I stumbled upon basikisk which
Installs a self-contained conda instance that is managed by the R/Bioconductor installation machinery IMHO this is a no-go since we are simply installing a competing package management system via a single package. I wonder whether we can "Freeze Python Dependencies Inside Bioconductor Packages" by providing some "fake r-bioc-basilisk" by simply depending from the correct Python versions that are needed (and if needed patch the consumers ... here MOFA2 accordingly). What do you think? Kind regards Andreas. -- http://fam-tille.de