Package: wnpp Version: unavailable; reported 2003-07-17 Severity: wishlist
* Package name : mummer Version : 3.0.4 Upstream Author : Adam Phillippy, et al <[EMAIL PROTECTED]> * URL : http://www.tigr.org/software/mummer/ * License : Artistic Description : rapid alignment of large DNA and amino acid sequences MUMmer is an open source software package for the rapid alignment of very large DNA and amino acid sequences. MUMmer relies on a suffice tree data structure for efficient pattern matching. . Suffix trees are suited for large data sets because they can be constructed and searched in linear time and space. This allows mummer to find all 20 base pair maximal exact matches between two ~5 million base pair bacterial genomes in 20 seconds on a typicall desktop machine. -- System Information: Debian Release: testing/unstable Architecture: i386 Kernel: Linux bioinfo 2.4.21-openmosix-1 #7 SMP Sun Jul 13 21:10:15 PDT 2003 i686 Locale: LANG=C, LC_CTYPE=C
