Package: wnpp Severity: wishlist Owner: Nilesh Patra <npatra...@gmail.com> X-Debbugs-CC: debian-de...@lists.debian.org
* Package name : yanosim Version : 0.1 Upstream Author : Matthew Parker * URL : https://github.com/bartongroup/yanosim <https://github.com/knsv/mermaid> * License : Expat Programming Lang: Python Description : Read simulator nanopore DRS datasets It has three options: 1 yanosim model: Creates an model of mismatches, insertions and deletions based on an alignment of nanopore DRS reads to a reference. Reads should be aligned to a transcriptome i.e. without spliced alignment, using minimap2. They should have the cs tag. . 2 yanosim quantify: Quantify the number of reads mapping to each transcript in a reference, so that the right number of reads can be simulated. . 3 yanosim simulate Given a model created using yanosim model, and per-transcript read counts created using yanosim simulate, simulate error-prone long-reads from the given fasta file. I take the responsibility to maintain this package.
