Package: wnpp Severity: wishlist Subject: ITP: resfinder-db -- ResFinder database is a curated database of acquired resistance genes Package: wnpp Owner: Andreas Tille <ti...@debian.org> Severity: wishlist
* Package name : resfinder-db Version : 0.0+git20191001.149209d Upstream Author : Ole Lund, Technical University of Denmark * URL : https://bitbucket.org/genomicepidemiology/resfinder * License : Apache-2.0 Programming Lang: Python Description : ResFinder database is a curated database of acquired resistance genes ResFinder identifies acquired antimicrobial resistance genes in total or partial sequenced isolates of bacteria. . ResFinder that uses BLAST for identification of acquired antimicrobial resistance genes in whole-genome data. As input, the method can use both pre-assembled, complete or partial genomes, and short sequence reads from four different sequencing platforms. The method was evaluated on 1862 GenBank files containing 1411 different resistance genes, as well as on 23 de-novo-sequenced isolates. . This package provides the database needed for resfinder. Remark: This package is maintained by Debian Med Packaging Team at https://salsa.debian.org/med-team/resfinder-db
