Package: wnpp Severity: wishlist Subject: ITP: skewer -- Package: wnpp Owner: Steffen Moeller <moel...@debian.org> Severity: wishlist
* Package name : skewer Version : 0.2.2 Upstream Author : by Hongshan Jiang <hongshan.ji...@gmail.com> * URL : https://github.com/relipmoc/skewer * License : MIT Programming Lang: C Description : skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences. . Features . * Detection and removal of adapter sequences * Insertion and deletion allowed in pattern matching * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads * Demultiplexing of barcoded sequencing runs * Multi-threading support * Trimming based on phred quality scores * IUPAC characters for barcodes and adapters * Compressed input and output support Remark: This package is maintained by Steffen Moeller at https://salsa.debian.org/med-team/skewer
