Package: wnpp Severity: wishlist Owner: Andreas Tille <ti...@debian.org>
* Package name : r-bioc-bitseq Version : 1.22.0 Upstream Author : Peter Glaus, Antti Honkela and Magnus Rattray * URL : https://bioconductor.org/packages/BitSeq/ * License : Artistic-2.0 Programming Lang: GNU R Description : transcript expression inference and analysis for RNA-seq data The BitSeq package is targeted for transcript expression analysis and differential expression analysis of RNA-seq data in two stage process. In the first stage it uses Bayesian inference methodology to infer expression of individual transcripts from individual RNA-seq experiments. The second stage of BitSeq embraces the differential expression analysis of transcript expression. Providing expression estimates from replicates of multiple conditions, Log-Normal model of the estimates is used for inferring the condition mean transcript expression and ranking the transcripts based on the likelihood of differential expression. Remark: This package is needed in BioLinux and thus a sensible target for the Debian Med team. The actual packaging will be done by the r-pkg team at https://salsa.debian.org/r-pkg-team/r-bioc-bitseq
