Your message dated Tue, 22 Mar 2016 19:49:14 +0000 with message-id <e1aisik-00073k...@franck.debian.org> and subject line Bug#813261: fixed in jhdf 2.9-4 has caused the Debian Bug report #813261, regarding jhdf: FTBFS: checking dependencies for HDF5 library... configure: error: HDF5 library needs SZIP, SZIP not defined. to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 813261: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=813261 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems
--- Begin Message ---Source: jhdf Version: 2.9-3 Severity: serious Justification: fails to build from source User: reproducible-bui...@lists.alioth.debian.org Usertags: ftbfs X-Debbugs-Cc: reproducible-bui...@lists.alioth.debian.org Dear Maintainer, jhdf fails to build from source in unstable/amd64: [..] dpkg-buildpackage -rfakeroot -D -us -uc -b dpkg-buildpackage: source package jhdf dpkg-buildpackage: source version 2.9-3 dpkg-buildpackage: source distribution unstable dpkg-buildpackage: source changed by Gilles Filippini <p...@debian.org> dpkg-source --before-build jhdf-2.9 dpkg-buildpackage: host architecture amd64 fakeroot debian/rules clean debian/rules:8: warning: overriding recipe for target 'debian/stamp-autotools-files' /usr/share/cdbs/1/class/autotools-files.mk:62: warning: ignoring old recipe for target 'debian/stamp-autotools-files' test -x debian/rules rm -f debian/stamp-makefile-build debian/stamp-makefile-install /usr/bin/make -C . -k distclean make[1]: Entering directory '/home/lamby/temp/cdt.20160130232955.jgWdBUQJlG/jhdf-2.9' make[1]: *** No rule to make target 'distclean'. make[1]: Leaving directory '/home/lamby/temp/cdt.20160130232955.jgWdBUQJlG/jhdf-2.9' /usr/share/cdbs/1/class/makefile.mk:55: recipe for target 'makefile-clean' failed make: [makefile-clean] Error 2 (ignored) rm -f debian/stamp-autotools rmdir --ignore-fail-on-non-empty . rmdir: failed to remove '.': Invalid argument /usr/share/cdbs/1/class/autotools.mk:52: recipe for target 'makefile-clean' failed make: [makefile-clean] Error 1 (ignored) for i in ./config/config.guess ./config/config.sub ; do \ if test -e $i.cdbs-orig ; then \ mv $i.cdbs-orig $i ; \ fi ; \ done dh_clean dh_clean: Pretending DH_COMPAT was set to 5 dh_clean: - this is a temporary measure to avoid FTBFS in packages dh_clean: relying on cdbs to set debian/compat to 5 during the build dh_clean: No compatibility level specified in debian/compat dh_clean: This package will soon FTBFS; time to fix it! rm -f debian/stamp-autotools-files debian/rules build debian/rules:8: warning: overriding recipe for target 'debian/stamp-autotools-files' /usr/share/cdbs/1/class/autotools-files.mk:62: warning: ignoring old recipe for target 'debian/stamp-autotools-files' test -x debian/rules mkdir -p "." echo 5 >debian/compat if test -e /usr/share/misc/config.guess ; then \ for i in ./config/config.guess ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.guess $i ; \ fi ; \ done ; \ fi if test -e /usr/share/misc/config.sub ; then \ for i in ./config/config.sub ; do \ if ! test -e $i.cdbs-orig ; then \ mv $i $i.cdbs-orig ; \ cp --remove-destination /usr/share/misc/config.sub $i ; \ fi ; \ done ; \ fi autoreconf -i aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in' touch debian/stamp-autotools-files chmod a+x /home/lamby/temp/cdt.20160130232955.jgWdBUQJlG/jhdf-2.9/./configure mkdir -p . cd . && CFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CXXFLAGS="-g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wall" CPPFLAGS="-Wdate-time -D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro" /home/lamby/temp/cdt.20160130232955.jgWdBUQJlG/jhdf-2.9/./configure --build=x86_64-linux-gnu --prefix=/home/lamby/temp/cdt.20160130232955.jgWdBUQJlG/jhdf-2.9/debian/tmp/ --includedir="\${prefix}/include" --mandir="\${prefix}/share/man" --infodir="\${prefix}/share/info" --sysconfdir=/etc --localstatedir=/var --libexecdir="\${prefix}/lib/jhdf" --srcdir=. --disable-maintainer-mode --disable-dependency-tracking --disable-silent-rules --with-jdk=/usr/lib/jvm/default-java/include/,/usr/lib/jvm/default-java/lib/ --with-classpath=/usr/lib/jvm/default-java/lib/ --with-javabin=/usr/lib/jvm/default-java/bin/ --with-libz=yes,/usr/lib --with-libjpeg=yes,/usr/lib/ --with-hdf5=/usr/include/hdf5/serial,/usr/lib/x86_64-linux-gnu/hdf5/serial --with-hdf4=/usr/include/hdf/,/usr/lib/ CC=gcc configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-dependency-tracking, --disable-silent-rules, --with-classpath checking if tr works... yes checking for gawk... no checking for mawk... mawk checking if expr works... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether make sets $(MAKE)... yes checking for a BSD-compatible install... /usr/bin/install -c checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for ceil in -lm... yes checking for rm... /bin/rm checking for find... /usr/bin/find checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu FYI the target here is: x86_64-pc-linux-gnu checking gzip compression... yes zlib found: -lz checking jpeg compression... yes jpeg found: -ljpeg checking szip compression... no checking HDF4 library... yes HDF4 found: -lmfhdf -ldf checking dependencies for HDF4 library... OK checking HDF5 library... yes HDF5 found: -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 checking dependencies for HDF5 library... configure: error: HDF5 library needs SZIP, SZIP not defined. /usr/share/cdbs/1/class/autotools.mk:42: recipe for target 'debian/stamp-autotools' failed make: *** [debian/stamp-autotools] Error 1 [..] The full build log is attached. Regards, -- ,''`. : :' : Chris Lamb `. `'` la...@debian.org / chris-lamb.co.uk `-
jhdf.2.9-3.unstable.amd64.log.txt.gz
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--- Begin Message ---Source: jhdf Source-Version: 2.9-4 We believe that the bug you reported is fixed in the latest version of jhdf, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 813...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Gilles Filippini <p...@debian.org> (supplier of updated jhdf package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 1.8 Date: Tue, 22 Mar 2016 20:18:49 +0100 Source: jhdf Binary: libjhdf5-java libjhdf5-jni libjhdf-doc libjhdf4-java libjhdf4-jni hdfview Architecture: source amd64 all Version: 2.9-4 Distribution: unstable Urgency: medium Maintainer: Debian Science Team <debian-science-maintainers@lists.alioth.debian.org> Changed-By: Gilles Filippini <p...@debian.org> Description: hdfview - Java HDF Object viewer libjhdf-doc - Java HDF Object Package - Documentation libjhdf4-java - Java HDF4 Object Package libjhdf4-jni - Java HDF4 Object Package (Java JNI library) libjhdf5-java - Java HDF5 Object Package libjhdf5-jni - Java HDF5 Object Package (Java JNI library) Closes: 813261 Changes: jhdf (2.9-4) unstable; urgency=medium . [ Andreas Tille ] * Fix watch file * machine readable copyright file * Use Files-Excluded to strip *.jar files * cme fix dpkg-control . [ Gilles Filippini ] * Team upload * Support linking against libsz (closes: #813261). Checksums-Sha1: 813f10452020f12f4b5942f0e82a3d9918b2cc8f 1953 jhdf_2.9-4.dsc fbdae58d93525f07c5a9133164d936de417de659 10744 jhdf_2.9-4.debian.tar.xz 26625c16af204fa7ff52df88f4c485f6857eb1d3 407142 hdfview_2.9-4_amd64.deb 785e9f333d46ae1d99b1c39853d4d276a0350be8 4154140 libjhdf-doc_2.9-4_all.deb 611b5654cffd07cd943722f03202a67200f1b982 174214 libjhdf4-java_2.9-4_amd64.deb c41158de1b97bc917f55360d4813fd57a1e7fe82 7080 libjhdf4-jni-dbgsym_2.9-4_amd64.deb 694cac0fa062630f13a45a34b845510f30bc9e92 29348 libjhdf4-jni_2.9-4_amd64.deb a36c0031434e7a8ae390e0092ed3f2f602132fb5 128772 libjhdf5-java_2.9-4_amd64.deb fdb80309f51ef7346fd29c25668fdfc2941975fa 20450 libjhdf5-jni-dbgsym_2.9-4_amd64.deb 2ffd93b2508b5e9baa4a2a10bc709ff74abd02ac 70810 libjhdf5-jni_2.9-4_amd64.deb Checksums-Sha256: 9613f5f165bc13d8ed331deb57686e2d2a15601c88707a7f7ddb1931cb357a16 1953 jhdf_2.9-4.dsc a02933d5bf6f76b8fb98660f2ed3c9f058759b92ec9fcc8046dbcb5f777665f7 10744 jhdf_2.9-4.debian.tar.xz ad473cbb87bf3a807a1f50872fd2e3c42ec7bb801eb66acfd111a6f638474a12 407142 hdfview_2.9-4_amd64.deb cf0e472c6b52f0a459e711d97167878ec8938e1fe5f8d3221fd38cefb3147292 4154140 libjhdf-doc_2.9-4_all.deb 70ecd07124f432a8f4776f3ee31c5eee6601129e414dfad328d6f8818c14f06f 174214 libjhdf4-java_2.9-4_amd64.deb 1ce4e2c0f63360404507cef89e40ee78c626071e52b50ecb5b9ca5e977a4a491 7080 libjhdf4-jni-dbgsym_2.9-4_amd64.deb 8ae6dc20290fb97766b28a49ef722080e8599b907fb467d55b508a2564e2f87e 29348 libjhdf4-jni_2.9-4_amd64.deb 3d37ad005c2a3d23d198df1cfed7c6c11a00e63ca1a1457410c648f10ce8c692 128772 libjhdf5-java_2.9-4_amd64.deb 4b616a1a7f0d3c73657d21207a4e681680dbf44b70209513e2244cb14b7dcc46 20450 libjhdf5-jni-dbgsym_2.9-4_amd64.deb 69f0879eab2d5b079138cb290d32275459bc48fc06e56d462fe9ea303c9246a5 70810 libjhdf5-jni_2.9-4_amd64.deb Files: 3652609d0004d82a3a4e3e884dd2d728 1953 libs optional jhdf_2.9-4.dsc ed78e57f19777174e1003dbd97b10474 10744 libs optional jhdf_2.9-4.debian.tar.xz 96a6899bb57c622ab0ab12f835f6273c 407142 science optional hdfview_2.9-4_amd64.deb 52629c5ce13c844ca31f7fc2484b9c1f 4154140 doc optional libjhdf-doc_2.9-4_all.deb 82b5079e73f49018dde3f225bc729047 174214 java optional libjhdf4-java_2.9-4_amd64.deb 70a02d764dca1d9cf6e4f2830ca027d9 7080 debug extra libjhdf4-jni-dbgsym_2.9-4_amd64.deb 677669964b222f877475eb003f78467e 29348 libs optional libjhdf4-jni_2.9-4_amd64.deb 5baf0b28df2c532f6374a26fcb06118f 128772 java optional libjhdf5-java_2.9-4_amd64.deb 2761f4fb3ecc028fa76ebc182f4dee8f 20450 debug extra libjhdf5-jni-dbgsym_2.9-4_amd64.deb 38484728dfeb1ebb7a5cc5775d381dd7 70810 libs optional libjhdf5-jni_2.9-4_amd64.deb -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQEcBAEBCAAGBQJW8Z3WAAoJEO/obGx//s+DB3UIAKxUpvnDSa5MWwj+AYiZ2kKi rDKBKe5WrfpCd5/BDdER9PEVG8pYH5EEONwguASPxjwcgt9PfynrIxvPLTV8hQb1 ZW8K7EpmirEKQydI69yTNuDL3Z/Wnr6YVfQelDayZ9VF2T74JYdmW/boOwkw58t6 ui6fs5dLmK2bjtPhJ5KNzyB48Ch1f3HqR/rmIsx03t36+f8EUdoYjoHAXPZ5o0Vn Xbgf96OkOsIxUZYPPc4FR28eQffD1vote03aoKvUOwhfddcqCxYS0ZXUN3dAy5dS dkmt3E1PUUIpleLKCMEXxi5qQy5fZJzmKEhCI9v9LMW8aUY9t9qtbxB7zSnS9R0= =inqK -----END PGP SIGNATURE-----
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