On Tue, 29 Sep 2015 21:28:07 +0200 Gilles Filippini <p...@debian.org> wrote: > On Tue, 29 Sep 2015 20:46:42 +0200 Gilles Filippini <p...@debian.org> wrote: > > Source: pytables > > Version: 3.2.1-1 > > Severity: serious > > Justification: FTBFS > > > > -----BEGIN PGP SIGNED MESSAGE----- > > Hash: SHA256 > > > > Hi, > > > > pytables FTBFS on a clean amd64 sid chroot. 4 tests fail with similar > > error messages: > > ====================================================================== > > ERROR: None (tables.tests.test_tables.RecArrayRangeTestCase) > > - ---------------------------------------------------------------------- > > Traceback (most recent call last): > > File > > "/tmp/buildd/pytables-3.2.1/build/lib.linux-x86_64-2.7/tables/tests/test_tables.py", > > line 2169, in test01a_range > > self.check_range() > > File > > "/tmp/buildd/pytables-3.2.1/build/lib.linux-x86_64-2.7/tables/tests/test_tables.py", > > line 2042, in check_range > > recarray = table.read(self.start, self.stop, self.step) > > File > > "/tmp/buildd/pytables-3.2.1/build/lib.linux-x86_64-2.7/tables/table.py", > > line 1965, in read > > arr = self._read(start, stop, step, field, out) > > File > > "/tmp/buildd/pytables-3.2.1/build/lib.linux-x86_64-2.7/tables/table.py", > > line 1887, in _read > > self.row._fill_col(result, start, stop, step, field) > > File "tables/tableextension.pyx", line 1272, in > > tables.tableextension.Row._fill_col (tables/tableextension.c:15021) > > ValueError: could not broadcast input array from shape (2) into shape (0) > > This is upstream issue #481 [1] which was fixed by commit 44dba04 [2]. > > [1] <https://github.com/PyTables/PyTables/issues/481> > [2] > <https://github.com/PyTables/PyTables/commit/44dba04d7d72f150a91553f4eb455684dfef0913.patch> > > I've successfully tested this patch, but then a python3.5 related error > occurs: > > Ran 5734 tests in 147.360s > > OK (skipped=42) > + cd /tmp/buildd/pytables-3.2.1/build/lib.linux-x86_64-3.5 > + env PYTHONPATH=. LOCPATH=/tmp/buildd/pytables-3.2.1/tmp-locales > LC_ALL=en_US.UTF-8 python3.5 tables/tests/test_all.py -vvv > Traceback (most recent call last): > File "tables/tests/test_all.py", line 10, in <module> > import tables > File > "/tmp/buildd/pytables-3.2.1/build/lib.linux-x86_64-3.5/tables/__init__.py", > line 123, in <module> > from tables.file import File, open_file, copy_file, openFile, copyFile > File > "/tmp/buildd/pytables-3.2.1/build/lib.linux-x86_64-3.5/tables/file.py", line > 31, in <module> > import numexpr > File "/usr/lib/python3/dist-packages/numexpr/__init__.py", line 40, in > <module> > from numexpr.expressions import E > File "/usr/lib/python3/dist-packages/numexpr/expressions.py", line 45, in > <module> > from numexpr import interpreter > ImportError: cannot import name 'interpreter' > debian/rules:58: recipe for target 'override_dh_install' failed > make[1]: *** [override_dh_install] Error 1 > make[1]: Leaving directory '/tmp/buildd/pytables-3.2.1' > debian/rules:26: recipe for target 'binary' failed > make: *** [binary] Error 2
That's just because numexpr hasn't been rebuilt for the python 3.5 transition yet, see: https://release.debian.org/transitions/html/python3.5.html It should work once that's done. Emilio -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
