Your message dated Sat, 02 May 2026 05:19:13 +0000
with message-id <[email protected]>
and subject line Bug#1135443: fixed in petsc 3.24.5+dfsg1-2
has caused the Debian Bug report #1135443,
regarding petsc: FTBFS: Error: Got unexpected extra arguments
(PETSC_DIR=/<<PKGBUILDDIR>> PETSC_ARCH=x86_64-linux-gnu-real-debug)
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1135443: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1135443
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: src:petsc
Version: 3.24.5+dfsg1-1
Severity: serious
Tags: ftbfs forky sid
Dear maintainer:
During a rebuild of all packages in unstable, this package failed to build.
Below you will find the last part of the build log (probably the most
relevant part, but not necessarily). If required, the full build log
is available here:
https://people.debian.org/~sanvila/build-logs/202605/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you cannot reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:petsc, so that this is still
visible in the BTS web page for this package.
Thanks.
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --with python3,fortran_mod
debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
if [ -d x86_64-linux-gnu-real-debug -a -f
x86_64-linux-gnu-real-debug/lib/petsc/conf/petscrules ]; then \
dh_auto_clean -plibpetsc-real3.24-dbg -ppetsc3.24-doc -- \
PETSC_DIR=/<<PKGBUILDDIR>> PETSC_ARCH=x86_64-linux-gnu-real-debug; \
fi
if [ -d x86_64-linux-gnu-real -a -f
x86_64-linux-gnu-real/lib/petsc/conf/petscrules ]; then \
dh_auto_clean -plibpetsc-real3.24-dev -- \
PETSC_DIR=/<<PKGBUILDDIR>> PETSC_ARCH=x86_64-linux-gnu-real; \
fi
if [ -d x86_64-linux-gnu-complex -a -f
x86_64-linux-gnu-complex/lib/petsc/conf/petscrules ]; then \
dh_auto_clean -plibpetsc-complex3.24-dev -- \
PETSC_DIR=/<<PKGBUILDDIR>> PETSC_ARCH=x86_64-linux-gnu-complex; \
[... snipped ...]
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testamrex; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
fi;\
fi;
C/C++ example src/snes/tutorials/ex19 run successfully with MUMPS
C/C++ example src/snes/tutorials/ex19 run successfully with SuiteSparse
C/C++ example src/snes/tutorials/ex19 run successfully with SuperLU_DIST
C/C++ example src/vec/vec/tests/ex47 run successfully with HDF5
Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
Completed PETSc check examples
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testex19
C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process
C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes
if [ "" = "" ]; then \
cd src/snes/tutorials >/dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_KOKKOS_KERNELS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" = "#define
PETSC_HAVE_KOKKOS_KERNELS 1" ] && [ "complex" = "real" ] && [ "double" =
"double" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex3k_kokkos; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_MUMPS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" = "#define
PETSC_HAVE_MUMPS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_fieldsplit_mumps; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUITESPARSE 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" = "#define
PETSC_HAVE_SUITESPARSE 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_suitesparse; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUPERLU_DIST 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" = "#define
PETSC_HAVE_SUPERLU_DIST 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_superlu_dist; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_ML 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" = "#define
PETSC_HAVE_ML 1" ] || [ "`grep -E '^#define PETSC_HAVE_TRILINOS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" = "#define
PETSC_HAVE_TRILINOS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_ml; \
fi; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_AMREX 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" = "#define
PETSC_HAVE_AMREX 1" ] && [ "`grep -E '^#define PETSC_HAVE_CUDA 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex/include/petscconf.h`" != "#define
PETSC_HAVE_CUDA 1" ]; then \
echo "Running amrex test example to verify correct installation";\
echo "Using PETSC_DIR=/<<PKGBUILDDIR>> and
PETSC_ARCH=x86_64-linux-gnu-complex";\
cd src/ksp/ksp/tutorials/amrex >/dev/null;\
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testamrex; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
fi;\
fi;
C/C++ example src/snes/tutorials/ex19 run successfully with MUMPS
C/C++ example src/snes/tutorials/ex19 run successfully with SuiteSparse
C/C++ example src/snes/tutorials/ex19 run successfully with SuperLU_DIST
C/C++ example src/vec/vec/tests/ex47 run successfully with HDF5
Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
Completed PETSc check examples
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testex19
C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process
C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes
if [ "" = "" ]; then \
cd src/snes/tutorials >/dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_KOKKOS_KERNELS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" =
"#define PETSC_HAVE_KOKKOS_KERNELS 1" ] && [ "complex" = "real" ] && [ "double"
= "double" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex3k_kokkos; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_MUMPS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" =
"#define PETSC_HAVE_MUMPS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_fieldsplit_mumps; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUITESPARSE 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" =
"#define PETSC_HAVE_SUITESPARSE 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_suitesparse; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUPERLU_DIST 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" =
"#define PETSC_HAVE_SUPERLU_DIST 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_superlu_dist; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_ML 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" =
"#define PETSC_HAVE_ML 1" ] || [ "`grep -E '^#define PETSC_HAVE_TRILINOS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" =
"#define PETSC_HAVE_TRILINOS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_ml; \
fi; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_AMREX 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" =
"#define PETSC_HAVE_AMREX 1" ] && [ "`grep -E '^#define PETSC_HAVE_CUDA 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug/include/petscconf.h`" !=
"#define PETSC_HAVE_CUDA 1" ]; then \
echo "Running amrex test example to verify correct installation";\
echo "Using PETSC_DIR=/<<PKGBUILDDIR>> and
PETSC_ARCH=x86_64-linux-gnu-complex-debug";\
cd src/ksp/ksp/tutorials/amrex >/dev/null;\
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testamrex; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
fi;\
fi;
C/C++ example src/snes/tutorials/ex19 run successfully with MUMPS
C/C++ example src/snes/tutorials/ex19 run successfully with SuiteSparse
C/C++ example src/snes/tutorials/ex19 run successfully with SuperLU_DIST
C/C++ example src/vec/vec/tests/ex47 run successfully with HDF5
Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
Completed PETSc check examples
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testex19
C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process
C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes
C/C++ example src/snes/tutorials/ex19 run successfully with HYPRE
if [ "" = "" ]; then \
cd src/snes/tutorials >/dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_KOKKOS_KERNELS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_KOKKOS_KERNELS 1" ] && [ "real" = "real" ] && [ "double" =
"double" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex3k_kokkos; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_MUMPS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_MUMPS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_fieldsplit_mumps; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUITESPARSE 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_SUITESPARSE 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_suitesparse; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUPERLU_DIST 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_SUPERLU_DIST 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_superlu_dist; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_ML 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_ML 1" ] || [ "`grep -E '^#define PETSC_HAVE_TRILINOS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_TRILINOS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_ml; \
fi; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_AMREX 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_AMREX 1" ] && [ "`grep -E '^#define PETSC_HAVE_CUDA 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-debug-64/include/petscconf.h`" !=
"#define PETSC_HAVE_CUDA 1" ]; then \
echo "Running amrex test example to verify correct installation";\
echo "Using PETSC_DIR=/<<PKGBUILDDIR>> and
PETSC_ARCH=x86_64-linux-gnu-real-debug-64";\
cd src/ksp/ksp/tutorials/amrex >/dev/null;\
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testamrex; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
fi;\
fi;
C/C++ example src/snes/tutorials/ex19 run successfully with MUMPS
C/C++ example src/snes/tutorials/ex19 run successfully with SuiteSparse
C/C++ example src/vec/vec/tests/ex47 run successfully with HDF5
Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
Completed PETSc check examples
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testex19
C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process
C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes
C/C++ example src/snes/tutorials/ex19 run successfully with HYPRE
if [ "" = "" ]; then \
cd src/snes/tutorials >/dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_KOKKOS_KERNELS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" = "#define
PETSC_HAVE_KOKKOS_KERNELS 1" ] && [ "real" = "real" ] && [ "double" = "double"
]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex3k_kokkos; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_MUMPS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" = "#define
PETSC_HAVE_MUMPS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_fieldsplit_mumps; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUITESPARSE 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" = "#define
PETSC_HAVE_SUITESPARSE 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_suitesparse; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUPERLU_DIST 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" = "#define
PETSC_HAVE_SUPERLU_DIST 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_superlu_dist; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_ML 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" = "#define
PETSC_HAVE_ML 1" ] || [ "`grep -E '^#define PETSC_HAVE_TRILINOS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" = "#define
PETSC_HAVE_TRILINOS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_ml; \
fi; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_AMREX 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" = "#define
PETSC_HAVE_AMREX 1" ] && [ "`grep -E '^#define PETSC_HAVE_CUDA 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-real-64/include/petscconf.h`" != "#define
PETSC_HAVE_CUDA 1" ]; then \
echo "Running amrex test example to verify correct installation";\
echo "Using PETSC_DIR=/<<PKGBUILDDIR>> and
PETSC_ARCH=x86_64-linux-gnu-real-64";\
cd src/ksp/ksp/tutorials/amrex >/dev/null;\
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testamrex; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-real-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
fi;\
fi;
C/C++ example src/snes/tutorials/ex19 run successfully with MUMPS
C/C++ example src/snes/tutorials/ex19 run successfully with SuiteSparse
C/C++ example src/vec/vec/tests/ex47 run successfully with HDF5
Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
Completed PETSc check examples
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testex19
C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process
C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes
if [ "" = "" ]; then \
cd src/snes/tutorials >/dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_KOKKOS_KERNELS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" = "#define
PETSC_HAVE_KOKKOS_KERNELS 1" ] && [ "complex" = "real" ] && [ "double" =
"double" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex3k_kokkos; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_MUMPS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" = "#define
PETSC_HAVE_MUMPS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_fieldsplit_mumps; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUITESPARSE 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" = "#define
PETSC_HAVE_SUITESPARSE 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_suitesparse; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUPERLU_DIST 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" = "#define
PETSC_HAVE_SUPERLU_DIST 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_superlu_dist; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_ML 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" = "#define
PETSC_HAVE_ML 1" ] || [ "`grep -E '^#define PETSC_HAVE_TRILINOS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" = "#define
PETSC_HAVE_TRILINOS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_ml; \
fi; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_AMREX 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" = "#define
PETSC_HAVE_AMREX 1" ] && [ "`grep -E '^#define PETSC_HAVE_CUDA 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-64/include/petscconf.h`" != "#define
PETSC_HAVE_CUDA 1" ]; then \
echo "Running amrex test example to verify correct installation";\
echo "Using PETSC_DIR=/<<PKGBUILDDIR>> and
PETSC_ARCH=x86_64-linux-gnu-complex-64";\
cd src/ksp/ksp/tutorials/amrex >/dev/null;\
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testamrex; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
fi;\
fi;
C/C++ example src/snes/tutorials/ex19 run successfully with MUMPS
C/C++ example src/snes/tutorials/ex19 run successfully with SuiteSparse
C/C++ example src/vec/vec/tests/ex47 run successfully with HDF5
Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
Completed PETSc check examples
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[2]: Entering directory '/<<PKGBUILDDIR>>'
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex-debug-64
PETSC_DIR=/<<PKGBUILDDIR>> DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff
clean-legacy
cd src/snes/tutorials >/dev/null; /usr/bin/make --no-print-directory -f
makefile PETSC_ARCH=x86_64-linux-gnu-complex-debug-64
PETSC_DIR=/<<PKGBUILDDIR>> DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff
testex19
C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process
C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes
if [ "" = "" ]; then \
cd src/snes/tutorials >/dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_KOKKOS_KERNELS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_KOKKOS_KERNELS 1" ] && [ "complex" = "real" ] && [ "double"
= "double" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex3k_kokkos; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_MUMPS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_MUMPS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_fieldsplit_mumps; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUITESPARSE 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_SUITESPARSE 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_suitesparse; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_SUPERLU_DIST 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_SUPERLU_DIST 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_superlu_dist; \
fi;\
if [ "`grep -E '^#define PETSC_HAVE_ML 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_ML 1" ] || [ "`grep -E '^#define PETSC_HAVE_TRILINOS 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_TRILINOS 1" ]; then \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff runex19_ml; \
fi; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
if [ "`grep -E '^#define PETSC_HAVE_AMREX 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" =
"#define PETSC_HAVE_AMREX 1" ] && [ "`grep -E '^#define PETSC_HAVE_CUDA 1'
/<<PKGBUILDDIR>>/x86_64-linux-gnu-complex-debug-64/include/petscconf.h`" !=
"#define PETSC_HAVE_CUDA 1" ]; then \
echo "Running amrex test example to verify correct installation";\
echo "Using PETSC_DIR=/<<PKGBUILDDIR>> and
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64";\
cd src/ksp/ksp/tutorials/amrex >/dev/null;\
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff testamrex; \
/usr/bin/make --no-print-directory -f makefile
PETSC_ARCH=x86_64-linux-gnu-complex-debug-64 PETSC_DIR=/<<PKGBUILDDIR>>
DIFF=/<<PKGBUILDDIR>>/lib/petsc/bin/petscdiff clean-legacy; \
cd - > /dev/null; \
fi;\
fi;
C/C++ example src/snes/tutorials/ex19 run successfully with MUMPS
C/C++ example src/snes/tutorials/ex19 run successfully with SuiteSparse
C/C++ example src/vec/vec/tests/ex47 run successfully with HDF5
Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process
Completed PETSc check examples
make[2]: Leaving directory '/<<PKGBUILDDIR>>'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
debian/rules override_dh_auto_test-indep
make[1]: Entering directory '/<<PKGBUILDDIR>>'
echo "Tests are run with arch-any builds".
Tests are run with arch-any builds.
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
create-stamp debian/debhelper-build-stamp
dh_prep
dh_installdirs
debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install -plibpetsc-real3.24-dbg -ppetsc3.24-doc
-plibpetsc3.24-dev-examples --destdir=debian/tmp/petsc3.24-real-debug -- \
PETSC_DIR=/<<PKGBUILDDIR>> PETSC_ARCH=x86_64-linux-gnu-real-debug
Usage: dh_auto_install [OPTIONS]
Try 'dh_auto_install --help' for help.
Error: Got unexpected extra arguments (PETSC_DIR=/<<PKGBUILDDIR>>
PETSC_ARCH=x86_64-linux-gnu-real-debug)
make[1]: *** [debian/rules:533: override_dh_auto_install] Error 2
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:229: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess failed with exit
status 2
--------------------------------------------------------------------------------
--- End Message ---
--- Begin Message ---
Source: petsc
Source-Version: 3.24.5+dfsg1-2
Done: Francesco Ballarin <[email protected]>
We believe that the bug you reported is fixed in the latest version of
petsc, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Francesco Ballarin <[email protected]> (supplier of updated petsc package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sat, 02 May 2026 04:55:51 +0000
Source: petsc
Architecture: source
Version: 3.24.5+dfsg1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Francesco Ballarin <[email protected]>
Closes: 1135443
Changes:
petsc (3.24.5+dfsg1-2) unstable; urgency=medium
.
* Pass PETSC_DIR and PETSC_ARCH as environment variables to dh_auto_install
to prevent errors like
dh_auto_install -plibpetsc-...-dev --destdir=debian/tmp/petsc.. -- \
PETSC_DIR=/build/petsc PETSC_ARCH=....
Usage: dh_auto_install [OPTIONS]
Try 'dh_auto_install --help' for help.
.
Error: Got unexpected extra arguments (PETSC_DIR=/build/petsc
PETSC_ARCH=...)
Backported from 3.25.0+dfsg1-1~exp1. Closes: #1135443.
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petsc_3.24.5+dfsg1-2.debian.tar.xz
5681d065e06b94c1da079ed6caf7d9821a0f2491 14024
petsc_3.24.5+dfsg1-2_source.buildinfo
Checksums-Sha256:
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petsc_3.24.5+dfsg1-2.dsc
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petsc_3.24.5+dfsg1-2.debian.tar.xz
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petsc_3.24.5+dfsg1-2_source.buildinfo
Files:
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ad09b81bb4f94b747d102c43698371bf 111360 devel optional
petsc_3.24.5+dfsg1-2.debian.tar.xz
b11e8649978b52633a593c296efcf470 14024 devel optional
petsc_3.24.5+dfsg1-2_source.buildinfo
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