Your message dated Tue, 12 Nov 2024 23:34:10 +0000
with message-id <[email protected]>
and subject line Bug#1087199: fixed in python-h5netcdf 1.4.0-3
has caused the Debian Bug report #1087199,
regarding python-h5netcdf: complex type failing in 32-bit systems
to be marked as done.
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1087199: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1087199
Debian Bug Tracking System
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--- Begin Message ---
Source: python-h5netcdf
Version: 1.4.0-1
Severity: normal
Control: forwarded -1 https://github.com/h5netcdf/h5netcdf/issues/243
The complex tests in h5netcdf 1.4.0 are failing on 32-bit systems.
Test logs at
https://ci.debian.net/data/autopkgtest/unstable/armel/p/python-h5netcdf/54210152/log.gz
(also, armhf, i386)
79s ______________________ test_complex_type_creation_errors
_______________________
79s
79s tmp_local_netcdf =
'/tmp/pytest-of-debci/pytest-0/test_complex_type_creation_err0/testfile.nc'
79s
79s @pytest.mark.skipif(
79s version.parse(netCDF4.__version__) < version.parse("1.7.0"),
79s reason="does not work before netCDF4 v1.7.0",
79s )
79s def test_complex_type_creation_errors(tmp_local_netcdf):
79s complex_array = np.array([0 + 0j, 1 + 0j, 0 + 1j, 1 + 1j, 0.25 +
0.75j])
79s
79s with legacyapi.Dataset(tmp_local_netcdf, "w") as ds:
79s ds.createDimension("x", size=len(complex_array))
79s with pytest.raises(TypeError, match="data type 'c4' not
understood"):
79s ds.createVariable("data", "c4", ("x",))
79s
79s with legacyapi.Dataset(tmp_local_netcdf, "w") as ds:
79s ds.createDimension("x", size=len(complex_array))
79s with pytest.raises(
79s TypeError,
79s match="Currently only 'complex64' and 'complex128' dtypes
are allowed.",
79s ):
79s > ds.createVariable("data", "c32", ("x",))
79s
79s tests/test_h5netcdf.py:2713:
79s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
_ _ _
79s /usr/lib/python3/dist-packages/h5netcdf/legacyapi.py:245: in createVariable
79s return super().create_variable(
79s /usr/lib/python3/dist-packages/h5netcdf/core.py:1234: in create_variable
79s return group._create_child_variable(
79s /usr/lib/python3/dist-packages/h5netcdf/core.py:1040: in
_create_child_variable
79s dtype = _check_dtype(self, dtype)
79s /usr/lib/python3/dist-packages/h5netcdf/core.py:702: in _check_dtype
79s group._root._check_valid_netcdf_dtype(dtype)
79s _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
_ _ _
79s
79s self = <Closed h5netcdf.legacyapi.Dataset>, dtype = 'c32'
79s
79s def _check_valid_netcdf_dtype(self, dtype):
79s > dtype = np.dtype(dtype)
79s E TypeError: data type 'c32' not understood
79s
79s /usr/lib/python3/dist-packages/h5netcdf/core.py:1604: TypeError
79s
79s During handling of the above exception, another exception occurred:
79s
79s tmp_local_netcdf =
'/tmp/pytest-of-debci/pytest-0/test_complex_type_creation_err0/testfile.nc'
79s
79s @pytest.mark.skipif(
79s version.parse(netCDF4.__version__) < version.parse("1.7.0"),
79s reason="does not work before netCDF4 v1.7.0",
79s )
79s def test_complex_type_creation_errors(tmp_local_netcdf):
79s complex_array = np.array([0 + 0j, 1 + 0j, 0 + 1j, 1 + 1j, 0.25 +
0.75j])
79s
79s with legacyapi.Dataset(tmp_local_netcdf, "w") as ds:
79s ds.createDimension("x", size=len(complex_array))
79s with pytest.raises(TypeError, match="data type 'c4' not
understood"):
79s ds.createVariable("data", "c4", ("x",))
79s
79s with legacyapi.Dataset(tmp_local_netcdf, "w") as ds:
79s ds.createDimension("x", size=len(complex_array))
79s > with pytest.raises(
79s TypeError,
79s match="Currently only 'complex64' and 'complex128' dtypes
are allowed.",
79s ):
79s E AssertionError: Regex pattern did not match.
79s E Regex: "Currently only 'complex64' and 'complex128' dtypes
are allowed."
79s E Input: "data type 'c32' not understood"
79s
79s tests/test_h5netcdf.py:2709: AssertionError
79s =========================== short test summary info
============================
79s FAILED tests/test_h5netcdf.py::test_complex_type_creation_errors -
AssertionE...
79s ============ 1 failed, 99 passed, 51 skipped, 1 deselected in 6.28s
============
--- End Message ---
--- Begin Message ---
Source: python-h5netcdf
Source-Version: 1.4.0-3
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
python-h5netcdf, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated python-h5netcdf package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Wed, 13 Nov 2024 00:08:15 +0100
Source: python-h5netcdf
Architecture: source
Version: 1.4.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 1087199
Changes:
python-h5netcdf (1.4.0-3) unstable; urgency=medium
.
* Team upload.
* replace debian patches 32bit_skip_complex_type_creation.patch and
test_h5py_TypeError.patch with fix_tests_PR244.patch, applying
upstream PR#244 to fix tests. Closes: #1087199.
Checksums-Sha1:
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python-h5netcdf_1.4.0-3.debian.tar.xz
Checksums-Sha256:
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python-h5netcdf_1.4.0-3.debian.tar.xz
Files:
96e747ac5874849818fb8886a58fcee0 2388 python optional
python-h5netcdf_1.4.0-3.dsc
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python-h5netcdf_1.4.0-3.debian.tar.xz
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