Your message dated Wed, 12 Jun 2024 10:36:55 +0000
with message-id <[email protected]>
and subject line Bug#1072939: fixed in paraview 5.12.1+dfsg-3
has caused the Debian Bug report #1072939,
regarding paraview: armel needs -latomic linking
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1072939: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1072939
Debian Bug Tracking System
Contact [email protected] with problems
--- Begin Message ---
Package: paraview
Version: 5.12.0+dfsg-4
Severity: important
Control: forwarded -1 https://gitlab.kitware.com/vtk/vtk/-/issues/19352
paraview FTBFS on armel with
bin/vtkWrapPython-pv5.12 -MF
/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkRemotingServerManagerPython/vtkSMDataSourceProxyPython.cxx.d
@/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkRemotingServerManagerPython/vtkRemotingServerManager-python.DEBUG.args
-o
/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkRemotingServerManagerPython/vtkSMDataSourceProxyPython.cxx
/<<PKGBUILDDIR>>/Remoting/ServerManager/vtkSMDataSourceProxy.h
[ 79%] Building CXX object
CMakeFiles/vtkRenderingOpenGL2CS.dir/CMakeFiles/vtkRenderingOpenGL2CS/vtkClearRGBPassClientServer.cxx.o
[ 79%] Generating Python wrapper sources for vtkOpenGLRenderer
bin/vtkWrapPython-pv5.12 -MF
/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkRenderingOpenGL2Python/vtkOpenGLRendererPython.cxx.d
@/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkRenderingOpenGL2Python/vtkRenderingOpenGL2-python.DEBUG.args
-o
/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkRenderingOpenGL2Python/vtkOpenGLRendererPython.cxx
/<<PKGBUILDDIR>>/VTK/Rendering/OpenGL2/vtkOpenGLRenderer.h
/usr/bin/c++ -Dkiss_fft_scalar=double
-DvtkRenderingCore_AUTOINIT_INCLUDE=\"/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkModuleAutoInit_5e984c86b020da752eb6357425f4f168.h\"
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Rendering/OpenGL2
-I/<<PKGBUILDDIR>>/VTK/Rendering/OpenGL2
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Common/Core
-I/<<PKGBUILDDIR>>/VTK/Common/Core
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/token/vtktoken/token
-I/<<PKGBUILDDIR>>/VTK/ThirdParty/token/vtktoken/token
-I/<<PKGBUILDDIR>>/VTK/ThirdParty/token/vtktoken
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/token/vtktoken
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/nlohmannjson/vtknlohmannjson
-I/<<PKGBUILDDIR>>/VTK/ThirdParty/nlohmannjson/vtknlohmannjson
-I/<<PKGBUILDDIR>>/VTK/ThirdParty/nlohmannjson/vtknlohmannjson/include
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Common/DataModel
-I/<<PKGBUILDDIR>>/VTK/Common/DataModel
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Common/Math
-I/<<PKGBUILDDIR>>/VTK/Common/Math
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/kissfft/vtkkissfft
-I/<<PKGBUILDDIR>>/VTK/ThirdParty/kissfft/vtkkissfft
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Common/Transforms
-I/<<PKGBUILDDIR>>/VTK/Common/Transforms
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Filters/General
-I/<<PKGBUILDDIR>>/VTK/Filters/General
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Common/ExecutionModel
-I/<<PKGBUILDDIR>>/VTK/Common/ExecutionModel
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Common/Misc
-I/<<PKGBUILDDIR>>/VTK/Common/Misc
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Filters/Core
-I/<<PKGBUILDDIR>>/VTK/Filters/Core
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/IO/Image
-I/<<PKGBUILDDIR>>/VTK/IO/Image
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Imaging/Core
-I/<<PKGBUILDDIR>>/VTK/Imaging/Core
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Rendering/Core
-I/<<PKGBUILDDIR>>/VTK/Rendering/Core
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Rendering/HyperTreeGrid
-I/<<PKGBUILDDIR>>/VTK/Rendering/HyperTreeGrid
-I/<<PKGBUILDDIR>>/build.python3.12/VTK/Rendering/UI
-I/<<PKGBUILDDIR>>/VTK/Rendering/UI
-I/<<PKGBUILDDIR>>/build.python3.12/Remoting/ClientServerStream
-I/<<PKGBUILDDIR>>/Remoting/ClientServerStream -isystem
/<<PKGBUILDDIR>>/build.python3.12/VTK/Utilities/KWIML -isystem
/<<PKGBUILDDIR>>/VTK/Utilities/KWIML -isystem
/<<PKGBUILDDIR>>/build.python3.12/VTK/Utilities/KWSys -isystem
/<<PKGBUILDDIR>>/VTK/Utilities/KWSys -isystem
/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/token -isystem
/<<PKGBUILDDIR>>/VTK/ThirdParty/token -isystem
/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/nlohmannjson -isystem
/<<PKGBUILDDIR>>/VTK/ThirdParty/nlohmannjson -isystem
/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/kissfft -isystem
/<<PKGBUILDDIR>>/VTK/ThirdParty/kissfft -isystem
/<<PKGBUILDDIR>>/build.python3.12/VTK/ThirdParty/glew -isystem
/<<PKGBUILDDIR>>/VTK/ThirdParty/glew -g -O2
-ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -D_LARGEFILE_SOURCE
-D_FILE_OFFSET_BITS=64 -D_TIME_BITS=64 -Wdate-time -D_FORTIFY_SOURCE=2 -O0 -g
-std=c++11 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT
CMakeFiles/vtkRenderingOpenGL2CS.dir/CMakeFiles/vtkRenderingOpenGL2CS/vtkClearRGBPassClientServer.cxx.o
-MF
CMakeFiles/vtkRenderingOpenGL2CS.dir/CMakeFiles/vtkRenderingOpenGL2CS/vtkClearRGBPassClientServer.cxx.o.d
-o
CMakeFiles/vtkRenderingOpenGL2CS.dir/CMakeFiles/vtkRenderingOpenGL2CS/vtkClearRGBPassClientServer.cxx.o
-c
/<<PKGBUILDDIR>>/build.python3.12/CMakeFiles/vtkRenderingOpenGL2CS/vtkClearRGBPassClientServer.cxx
/usr/bin/ld:
../../../lib/arm-linux-gnueabi/libvtkCommonDataModel-pv5.12.so.5.12: undefined
reference to `__atomic_fetch_add_8'
[ 79%] Generating Python wrapper sources for vtkSMDataTypeDomain
collect2: error: ld returned 1 exit status
see
https://buildd.debian.org/status/fetch.php?pkg=paraview&arch=armel&ver=5.12.1%2Bdfsg-2&stamp=1718029171&raw=0
The problem with atomics is discussed upstream (VTK) at
https://gitlab.kitware.com/vtk/vtk/-/issues/19352
see also
https://gitlab.kitware.com/cmake/cmake/-/issues/23021
https://github.com/google/highway/pull/1008/files
Should be fixed in the toolchain (gcc) not in applications.
in the meantime probably best for paraview to follow the VTK patch
https://salsa.debian.org/science-team/vtk9/-/merge_requests/1
--- End Message ---
--- Begin Message ---
Source: paraview
Source-Version: 5.12.1+dfsg-3
Done: Drew Parsons <[email protected]>
We believe that the bug you reported is fixed in the latest version of
paraview, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [email protected],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <[email protected]> (supplier of updated paraview package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [email protected])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Wed, 12 Jun 2024 11:56:07 +0200
Source: paraview
Architecture: source
Version: 5.12.1+dfsg-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team
<[email protected]>
Changed-By: Drew Parsons <[email protected]>
Closes: 1072939
Changes:
paraview (5.12.1+dfsg-3) unstable; urgency=medium
.
* Team upload.
* follow the example of vtk9 (MR#1) and link -latomic on armel
and other (32-bit) arches that need it. Closes: #1072939.
* skip xdmf3 support on mips64el
(gives "relocation truncated" errors)
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paraview_5.12.1+dfsg-3.debian.tar.xz
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paraview_5.12.1+dfsg-3_source.buildinfo
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Files:
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