Package: release.debian.org Severity: normal User: release.debian....@packages.debian.org Usertags: unblock Control: block -1 with 928368
Please unblock package papi Hi, there are two things that need to be fixed in PAPI for buster. * transition libpapi5 -> libpapi5.7, (one package needs a binNMU), see #928368 for details (upstream has now accepted and applied my patch) * removal of non-dfsg-free iozone code (only used for tests for a component not included in our builds, so no negative effect) The package is not uploaded to unstable yet, waiting for 5.7.0-2 to pass experimental/NEW for libpapi5.7. debian/changelog | 16 + debian/control | 12 +- debian/copyright | 6 +- debian/gbp.conf | 2 +- debian/libpapi5.install | 2 - debian/{libpapi5.README.Debian => libpapiSOVERSION.README.Debian} | 0 debian/{libpapi5.docs => libpapiSOVERSION.docs} | 0 debian/libpapiSOVERSION.install | 2 + debian/{libpapi5.symbols => libpapiSOVERSION.symbols} | 20 +- debian/patches/0001-set-SONAME-to-libpapi.so.-PAPIVER-.-PAPIREV.patch | 163 + debian/patches/0002-Clean-up-of-carriage-return-character-M-from.patch | 119 + debian/patches/do-not-ignore-failures.patch | 8 +- debian/patches/for-debian-no-rpath.patch | 4 +- debian/patches/series | 2 + debian/rules | 20 + debian/watch | 3 +- src/components/appio/tests/iozone/Changes.txt | 2409 ---- src/components/appio/tests/iozone/Generate_Graphs | 32 - src/components/appio/tests/iozone/Gnuplot.txt | 23 - src/components/appio/tests/iozone/client_list | 36 - src/components/appio/tests/iozone/fileop.c | 1389 --- src/components/appio/tests/iozone/gengnuplot.sh | 57 - src/components/appio/tests/iozone/gnu3d.dem | 146 - src/components/appio/tests/iozone/gnuplot.dem | 60 - src/components/appio/tests/iozone/gnuplotps.dem | 63 - src/components/appio/tests/iozone/iozone.c | 25297 --------------------------------------- src/components/appio/tests/iozone/iozone_visualizer.pl | 262 - src/components/appio/tests/iozone/libasync.c | 1604 --- src/components/appio/tests/iozone/libbif.c | 452 - src/components/appio/tests/iozone/makefile | 1461 --- src/components/appio/tests/iozone/pit_server.c | 831 -- src/components/appio/tests/iozone/read_telemetry | 29 - src/components/appio/tests/iozone/report.pl | 150 - src/components/appio/tests/iozone/spec.in | 107 - src/components/appio/tests/iozone/write_telemetry | 29 - 35 files changed, 350 insertions(+), 34466 deletions(-) A git diff (since it better copes with the renames) from 5.7.0-1 in buster with the deletions excluded is attached. Obviously still needs a dch -r :-) unblock papi/5.7.0+dfsg-1 Thanks for considering, Andreas
diff --git a/debian/changelog b/debian/changelog index d019e5d..2c87196 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,19 @@ +papi (5.7.0+dfsg-1) UNRELEASED; urgency=medium + + * Repack upstream tarball to remove src/components/appio/tests/iozone/* + which does not permit distribution of derivative works. (Closes: #928959) + + -- Andreas Beckmann <a...@debian.org> Mon, 20 May 2019 14:35:18 +0200 + +papi (5.7.0-2) experimental; urgency=medium + + * Restore support for changing the SOVERSION frequently. + * Change SONAME to libpapi.so.5.7. (Closes: #928367) + * Bump libpfm4-dev B-D to >= 4.10.1+git7. + * Upload to experimental. + + -- Andreas Beckmann <a...@debian.org> Mon, 06 May 2019 02:14:13 +0200 + papi (5.7.0-1) unstable; urgency=medium * New upstream release. diff --git a/debian/control b/debian/control index 9cb1a61..8da8e4c 100644 --- a/debian/control +++ b/debian/control @@ -7,7 +7,7 @@ Uploaders: Andreas Beckmann <a...@debian.org> Build-Depends: debhelper-compat (= 12), - libpfm4-dev (>= 4.10.1+git6), + libpfm4-dev (>= 4.10.1+git7), gfortran, Rules-Requires-Root: no Standards-Version: 4.3.0 @@ -15,15 +15,17 @@ Homepage: https://icl.utk.edu/papi/software/index.html Vcs-Browser: https://salsa.debian.org/hpc-team/papi Vcs-Git: https://salsa.debian.org/hpc-team/papi.git -Package: libpapi5 +Package: libpapi5.7 Section: libs Architecture: any Multi-Arch: same Pre-Depends: ${misc:Pre-Depends} Depends: ${shlibs:Depends}, ${misc:Depends} -Breaks: libpapi5.3 -Replaces: libpapi5.3 +Breaks: + libpapi5 (>= 5.7), +Replaces: + libpapi5 (>= 5.7), Description: PAPI runtime (shared libraries) Performance Application Programming Interface (PAPI) provides the tool designer and application engineer with a consistent interface and methodology @@ -45,7 +47,7 @@ Section: libdevel Architecture: any Multi-Arch: same Depends: - libpapi5 (= ${binary:Version}), + libpapi${papi:SOVERSION} (= ${binary:Version}), ${misc:Depends} Description: PAPI development files (headers and API documentation) Performance Application Programming Interface (PAPI) provides the tool diff --git a/debian/copyright b/debian/copyright index ab565fe..3d67d68 100644 --- a/debian/copyright +++ b/debian/copyright @@ -1,15 +1,13 @@ Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: papi Source: https://icl.utk.edu/papi/software/index.html +Files-Excluded: + src/components/appio/tests/iozone Files: * Copyright: 2005-2015 University of Tennessee License: BSD-3-Clause -Files: src/components/appio/tests/iozone/gengnuplot.sh -Copyright: 2001 Yves Rougy <y...@rougy.net> -License: GPL-2+ - Files: src/components/cuda/tests/nvlink_bandwidth* src/components/cuda/tests/simpleMultiGPU* src/components/cuda/tests/timer.h diff --git a/debian/gbp.conf b/debian/gbp.conf index b851e1b..56bdfa1 100644 --- a/debian/gbp.conf +++ b/debian/gbp.conf @@ -1,3 +1,3 @@ [DEFAULT] -#compression = xz +compression = xz compression-level = 9 diff --git a/debian/libpapi5.install b/debian/libpapi5.install deleted file mode 100644 index 9ea1476..0000000 diff --git a/debian/libpapi5.README.Debian b/debian/libpapiSOVERSION.README.Debian similarity index 100% rename from debian/libpapi5.README.Debian rename to debian/libpapiSOVERSION.README.Debian diff --git a/debian/libpapi5.docs b/debian/libpapiSOVERSION.docs similarity index 100% rename from debian/libpapi5.docs rename to debian/libpapiSOVERSION.docs diff --git a/debian/libpapiSOVERSION.install b/debian/libpapiSOVERSION.install new file mode 100644 index 0000000..41ad231 --- /dev/null +++ b/debian/libpapiSOVERSION.install @@ -0,0 +1,2 @@ +usr/lib/*/lib*.so.* +usr/share/papi/papi_events.csv usr/share/papi/@SOVERSION@/ diff --git a/debian/libpapi5.symbols b/debian/libpapiSOVERSION.symbols similarity index 97% rename from debian/libpapi5.symbols rename to debian/libpapiSOVERSION.symbols index 82c78e4..98d059e 100644 --- a/debian/libpapi5.symbols +++ b/debian/libpapiSOVERSION.symbols @@ -1,4 +1,4 @@ -libpapi.so.5 #PACKAGE# #MINVER# +libpapi.so.@SOVERSION@ #PACKAGE# #MINVER# * Build-Depends-Package: libpapi-dev PAPIF_ACCUM@Base 0 PAPIF_ACCUM_COUNTERS@Base 0 @@ -10,7 +10,7 @@ libpapi.so.5 #PACKAGE# #MINVER# PAPIF_CREATE_EVENTSET@Base 0 PAPIF_DESTROY_EVENTSET@Base 0 PAPIF_ENUM_EVENT@Base 0 - PAPIF_EPC@Base 5.2.0 + PAPIF_EPC@Base 0 PAPIF_EVENT_CODE_TO_NAME@Base 0 PAPIF_EVENT_NAME_TO_CODE@Base 0 PAPIF_FLIPS@Base 0 @@ -64,7 +64,7 @@ libpapi.so.5 #PACKAGE# #MINVER# PAPIF_STOP_COUNTERS@Base 0 PAPIF_THREAD_ID@Base 0 PAPIF_THREAD_INIT@Base 0 - PAPIF_UNREGISTER_THREAD@Base 5.6.0 + PAPIF_UNREGISTER_THREAD@Base 0 PAPIF_UNREGSTER_THREAD@Base 0 PAPIF_WRITE@Base 0 PAPIF_num_cmp_hwctrs@Base 0 @@ -85,7 +85,7 @@ libpapi.so.5 #PACKAGE# #MINVER# PAPI_disable_component_by_name@Base 0 PAPI_enum_cmp_event@Base 0 PAPI_enum_event@Base 0 - PAPI_epc@Base 5.2.0 + PAPI_epc@Base 0 PAPI_event_code_to_name@Base 0 PAPI_event_name_to_code@Base 0 PAPI_flips@Base 0 @@ -186,9 +186,9 @@ libpapi.so.5 #PACKAGE# #MINVER# papif_enum_event@Base 0 papif_enum_event_@Base 0 papif_enum_event__@Base 0 - papif_epc@Base 5.2.0 - papif_epc_@Base 5.2.0 - papif_epc__@Base 5.2.0 + papif_epc@Base 0 + papif_epc_@Base 0 + papif_epc__@Base 0 papif_event_code_to_name@Base 0 papif_event_code_to_name_@Base 0 papif_event_code_to_name__@Base 0 @@ -357,9 +357,9 @@ libpapi.so.5 #PACKAGE# #MINVER# papif_unlock@Base 0 papif_unlock_@Base 0 papif_unlock__@Base 0 - papif_unregister_thread@Base 5.6 - papif_unregister_thread_@Base 5.6 - papif_unregister_thread__@Base 5.6 + papif_unregister_thread@Base 0 + papif_unregister_thread_@Base 0 + papif_unregister_thread__@Base 0 papif_unregster_thread@Base 0 papif_unregster_thread_@Base 0 papif_unregster_thread__@Base 0 diff --git a/debian/patches/0001-set-SONAME-to-libpapi.so.-PAPIVER-.-PAPIREV.patch b/debian/patches/0001-set-SONAME-to-libpapi.so.-PAPIVER-.-PAPIREV.patch new file mode 100644 index 0000000..f7688dd --- /dev/null +++ b/debian/patches/0001-set-SONAME-to-libpapi.so.-PAPIVER-.-PAPIREV.patch @@ -0,0 +1,163 @@ +From 5434010ff4057d6e31493afcb317ba69d01d0e24 Mon Sep 17 00:00:00 2001 +From: Andreas Beckmann <a.beckm...@fz-juelich.de> +Date: Mon, 6 May 2019 18:28:14 -0400 +Subject: [PATCH 1/2] [PATCH] set SONAME to libpapi.so.$(PAPIVER).$(PAPIREV) + +The version check in PAPI_library_init() requires matching +PAPI_VER_CURRENT, therefore libpapi.so.5 from papi-5.6.x and papi-5.7.x +are not interchangeable, but require applications to be recompiled. + +Change the SONAME to contain the two version components that define +PAPI_VER_CURRENT, thereafter upgrading the shared library to a new +version does no longer break existing applications (which will pick up +the new SONAME upon recompilation). + +Introduce a new variable PAPISOVER and use it in all places where +the SONAME is being used. + +drop unused symlinks with three version components: +$(PAPIVER).$(PAPIREV).$(PAPIAGE) + +Signed-off-by: Heike Jagode <jag...@icl.utk.edu> +--- + src/Makefile.in | 1 + + src/Makefile.inc | 16 +++++++--------- + src/Rules.perfmon2 | 4 ++-- + src/configure | 5 ++++- + src/configure.in | 4 +++- + 5 files changed, 17 insertions(+), 13 deletions(-) + +diff --git a/src/Makefile.in b/src/Makefile.in +index 99f0c9e5e..fcc41b996 100644 +--- a/src/Makefile.in ++++ b/src/Makefile.in +@@ -75,6 +75,7 @@ PMAPI = @PMAPI@ + PMINIT = @PMINIT@ + SETPATH = @SETPATH@ + SHLIB = @SHLIB@ ++PAPISOVER = @PAPISOVER@ + VLIB = @VLIB@ + SHLIBDEPS = @SHLIBDEPS@ + SHOW_CONF = @SHOW_CONF@ +diff --git a/src/Makefile.inc b/src/Makefile.inc +index 9497326c7..69b428f7e 100644 +--- a/src/Makefile.inc ++++ b/src/Makefile.inc +@@ -58,13 +58,13 @@ $(LIBRARY): $(OBJECTS) + rm -f $(LIBRARY) + $(AR) $(ARG64) rv $(LIBRARY) $(OBJECTS) + +-shared: libpapi.so libpapi.so.$(PAPIVER) ++shared: libpapi.so libpapi.so.$(PAPISOVER) + +-libpapi.so libpapi.so.$(PAPIVER): $(SHLIB) ++libpapi.so libpapi.so.$(PAPISOVER): $(SHLIB) + ln -sf $(SHLIB) $@ + + $(SHLIB): $(HEADERS) $(SOURCES) $(SHLIBOBJS) +- rm -f $(SHLIB) libpapi.so libpapi.so.$(PAPIVER); ++ rm -f $(SHLIB) libpapi.so libpapi.so.$(PAPISOVER) + $(CC_SHR) $(LIBCFLAGS) $(OPTFLAGS) $(SOURCES) $(SHLIBOBJS) -o $@ $(SHLIBDEPS) $(LDFLAGS) + @set -ex; if test "$(POST_BUILD)" != "" ; then \ + -$(POST_BUILD) ; \ +@@ -258,7 +258,7 @@ ifneq (${COMPONENTS},) + endif + + clean: comp_tests_clean native_clean +- rm -rf $(LIBRARY) $(SHLIB) libpapi.so libpapi.so.$(PAPIVER) $(OBJECTS) core rii_files genpapifdef *~ so_locations papi_fwrappers_.c papi_fwrappers__.c upper_PAPI_FWRAPPERS.c ++ rm -rf $(LIBRARY) $(SHLIB) libpapi.so libpapi.so.$(PAPISOVER) $(OBJECTS) core rii_files genpapifdef *~ so_locations papi_fwrappers_.c papi_fwrappers__.c upper_PAPI_FWRAPPERS.c + $(MAKE) -C ../doc clean + $(MAKE) -C ctests clean + $(MAKE) -C ftests clean +@@ -317,8 +317,7 @@ install-lib: native_install + cp -p $(SHLIB) $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC); \ + chmod go+r $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) ; \ + cd $(DESTDIR)$(LIBDIR); \ +- ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE); \ +- ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so.$(PAPIVER); \ ++ ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so.$(PAPISOVER); \ + ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so; \ + fi + +@@ -352,9 +351,8 @@ install-pkgconf: + -mkdir -p $(DESTDIR)$(LIBPC) + -chmod go+rx $(DESTDIR)$(LIBPC) + cp papi.pc $(DESTDIR)$(LIBPC)/papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc +- cd $(DESTDIR)$(LIBPC); ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).pc; +- cd $(DESTDIR)$(LIBPC); ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc papi-$(PAPIVER).pc; +- cd $(DESTDIR)$(LIBPC); ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc papi.pc; ++ ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi-$(PAPISOVER).pc ++ ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi.pc + + # + # Dummy targets for configurations that do not also include a Rules file with targets +diff --git a/src/Rules.perfmon2 b/src/Rules.perfmon2 +index 4f86b6c87..f17aa877d 100644 +--- a/src/Rules.perfmon2 ++++ b/src/Rules.perfmon2 +@@ -60,8 +60,8 @@ endif + -install -d $(DESTDIR)$(LIBDIR) + ifneq (,$(findstring shared,$(LIBS))) + cp -p $(SHLIB) $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) +- cd $(DESTDIR)$(LIBDIR); ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so.$(PAPIVER) +- cd $(DESTDIR)$(LIBDIR); ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so ++ ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPISOVER) ++ ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) $(DESTDIR)$(LIBDIR)/libpapi.so + endif + -install -d $(DESTDIR)$(DATADIR) + cp -f ./papi_events.csv $(DESTDIR)$(DATADIR) +diff --git a/src/configure b/src/configure +index 362dac999..922fee51b 100755 +--- a/src/configure ++++ b/src/configure +@@ -664,6 +664,7 @@ CPUCOMPONENT_NAME + OPTFLAGS + PAPICFLAGS + VLIB ++PAPISOVER + SHLIB + LIBRARY + FILENAME +@@ -6190,7 +6191,8 @@ CTEST_TARGETS="all" + FTEST_TARGETS="all" + LIBRARY=libpapi.a + SHLIB='libpapi.so.5.7.0.0' +-VLIB='libpapi.so.$(PAPIVER)' ++PAPISOVER='$(PAPIVER).$(PAPIREV)' ++VLIB='libpapi.so.$(PAPISOVER)' + OMPCFLGS=-fopenmp + CC_R='$(CC) -pthread' + CC_SHR='$(CC) -fPIC -DPIC -shared -Wl,-soname -Wl,$(VLIB) -Xlinker "-rpath" -Xlinker "$(LIBDIR)"' +@@ -6788,6 +6790,7 @@ $as_echo "$PAPI_EVENTS_CSV" >&6; } + + + ++ + if test "$cross_compiling" = "yes" ; then + { $as_echo "$as_me:${as_lineno-$LINENO}: Compiling genpapifdef with $nativecc because cross compiling" >&5 + $as_echo "$as_me: Compiling genpapifdef with $nativecc because cross compiling" >&6;} +diff --git a/src/configure.in b/src/configure.in +index db16d3dca..e1d255948 100644 +--- a/src/configure.in ++++ b/src/configure.in +@@ -1262,7 +1262,8 @@ CTEST_TARGETS="all" + FTEST_TARGETS="all" + LIBRARY=libpapi.a + SHLIB='libpapi.so.AC_PACKAGE_VERSION' +-VLIB='libpapi.so.$(PAPIVER)' ++PAPISOVER='$(PAPIVER).$(PAPIREV)' ++VLIB='libpapi.so.$(PAPISOVER)' + OMPCFLGS=-fopenmp + CC_R='$(CC) -pthread' + CC_SHR='$(CC) -fPIC -DPIC -shared -Wl,-soname -Wl,$(VLIB) -Xlinker "-rpath" -Xlinker "$(LIBDIR)"' +@@ -1769,6 +1770,7 @@ AC_SUBST(CPU) + AC_SUBST(FILENAME) + AC_SUBST(LIBRARY) + AC_SUBST(SHLIB) ++AC_SUBST(PAPISOVER) + AC_SUBST(VLIB) + AC_SUBST(PAPICFLAGS) + AC_SUBST(OPTFLAGS) +-- +2.11.0 + diff --git a/debian/patches/0002-Clean-up-of-carriage-return-character-M-from.patch b/debian/patches/0002-Clean-up-of-carriage-return-character-M-from.patch new file mode 100644 index 0000000..ed8ab48 --- /dev/null +++ b/debian/patches/0002-Clean-up-of-carriage-return-character-M-from.patch @@ -0,0 +1,119 @@ +From 6676556a79ed2e8f5840eecc23f8a26cf040f4c2 Mon Sep 17 00:00:00 2001 +From: Heike Jagode <jag...@icl.utk.edu> +Date: Tue, 7 May 2019 10:29:54 -0400 +Subject: [PATCH 2/2] Clean up of carriage return character (^M) from previous + patch (commit 5434010). + +Thanks to Steve Kaufmann from Cray! +--- + src/Makefile.in | 2 +- + src/Makefile.inc | 14 +++++++------- + src/Rules.perfmon2 | 4 ++-- + src/configure.in | 6 +++--- + 4 files changed, 13 insertions(+), 13 deletions(-) + +diff --git a/src/Makefile.in b/src/Makefile.in +index fcc41b996..4334c3e2b 100644 +--- a/src/Makefile.in ++++ b/src/Makefile.in +@@ -75,7 +75,7 @@ PMAPI = @PMAPI@ + PMINIT = @PMINIT@ + SETPATH = @SETPATH@ + SHLIB = @SHLIB@ +-PAPISOVER = @PAPISOVER@ ++PAPISOVER = @PAPISOVER@ + VLIB = @VLIB@ + SHLIBDEPS = @SHLIBDEPS@ + SHOW_CONF = @SHOW_CONF@ +diff --git a/src/Makefile.inc b/src/Makefile.inc +index 69b428f7e..c7d6a3953 100644 +--- a/src/Makefile.inc ++++ b/src/Makefile.inc +@@ -58,13 +58,13 @@ $(LIBRARY): $(OBJECTS) + rm -f $(LIBRARY) + $(AR) $(ARG64) rv $(LIBRARY) $(OBJECTS) + +-shared: libpapi.so libpapi.so.$(PAPISOVER) ++shared: libpapi.so libpapi.so.$(PAPISOVER) + +-libpapi.so libpapi.so.$(PAPISOVER): $(SHLIB) ++libpapi.so libpapi.so.$(PAPISOVER): $(SHLIB) + ln -sf $(SHLIB) $@ + + $(SHLIB): $(HEADERS) $(SOURCES) $(SHLIBOBJS) +- rm -f $(SHLIB) libpapi.so libpapi.so.$(PAPISOVER) ++ rm -f $(SHLIB) libpapi.so libpapi.so.$(PAPISOVER) + $(CC_SHR) $(LIBCFLAGS) $(OPTFLAGS) $(SOURCES) $(SHLIBOBJS) -o $@ $(SHLIBDEPS) $(LDFLAGS) + @set -ex; if test "$(POST_BUILD)" != "" ; then \ + -$(POST_BUILD) ; \ +@@ -258,7 +258,7 @@ ifneq (${COMPONENTS},) + endif + + clean: comp_tests_clean native_clean +- rm -rf $(LIBRARY) $(SHLIB) libpapi.so libpapi.so.$(PAPISOVER) $(OBJECTS) core rii_files genpapifdef *~ so_locations papi_fwrappers_.c papi_fwrappers__.c upper_PAPI_FWRAPPERS.c ++ rm -rf $(LIBRARY) $(SHLIB) libpapi.so libpapi.so.$(PAPISOVER) $(OBJECTS) core rii_files genpapifdef *~ so_locations papi_fwrappers_.c papi_fwrappers__.c upper_PAPI_FWRAPPERS.c + $(MAKE) -C ../doc clean + $(MAKE) -C ctests clean + $(MAKE) -C ftests clean +@@ -317,7 +317,7 @@ install-lib: native_install + cp -p $(SHLIB) $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC); \ + chmod go+r $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) ; \ + cd $(DESTDIR)$(LIBDIR); \ +- ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so.$(PAPISOVER); \ ++ ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so.$(PAPISOVER); \ + ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) libpapi.so; \ + fi + +@@ -351,8 +351,8 @@ install-pkgconf: + -mkdir -p $(DESTDIR)$(LIBPC) + -chmod go+rx $(DESTDIR)$(LIBPC) + cp papi.pc $(DESTDIR)$(LIBPC)/papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc +- ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi-$(PAPISOVER).pc +- ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi.pc ++ ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi-$(PAPISOVER).pc ++ ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi.pc + + # + # Dummy targets for configurations that do not also include a Rules file with targets +diff --git a/src/Rules.perfmon2 b/src/Rules.perfmon2 +index f17aa877d..06b7b4554 100644 +--- a/src/Rules.perfmon2 ++++ b/src/Rules.perfmon2 +@@ -60,8 +60,8 @@ endif + -install -d $(DESTDIR)$(LIBDIR) + ifneq (,$(findstring shared,$(LIBS))) + cp -p $(SHLIB) $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) +- ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPISOVER) +- ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) $(DESTDIR)$(LIBDIR)/libpapi.so ++ ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) $(DESTDIR)$(LIBDIR)/libpapi.so.$(PAPISOVER) ++ ln -sf libpapi.so.$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC) $(DESTDIR)$(LIBDIR)/libpapi.so + endif + -install -d $(DESTDIR)$(DATADIR) + cp -f ./papi_events.csv $(DESTDIR)$(DATADIR) +diff --git a/src/configure.in b/src/configure.in +index e1d255948..99b6353bc 100644 +--- a/src/configure.in ++++ b/src/configure.in +@@ -1262,8 +1262,8 @@ CTEST_TARGETS="all" + FTEST_TARGETS="all" + LIBRARY=libpapi.a + SHLIB='libpapi.so.AC_PACKAGE_VERSION' +-PAPISOVER='$(PAPIVER).$(PAPIREV)' +-VLIB='libpapi.so.$(PAPISOVER)' ++PAPISOVER='$(PAPIVER).$(PAPIREV)' ++VLIB='libpapi.so.$(PAPISOVER)' + OMPCFLGS=-fopenmp + CC_R='$(CC) -pthread' + CC_SHR='$(CC) -fPIC -DPIC -shared -Wl,-soname -Wl,$(VLIB) -Xlinker "-rpath" -Xlinker "$(LIBDIR)"' +@@ -1770,7 +1770,7 @@ AC_SUBST(CPU) + AC_SUBST(FILENAME) + AC_SUBST(LIBRARY) + AC_SUBST(SHLIB) +-AC_SUBST(PAPISOVER) ++AC_SUBST(PAPISOVER) + AC_SUBST(VLIB) + AC_SUBST(PAPICFLAGS) + AC_SUBST(OPTFLAGS) +-- +2.11.0 + diff --git a/debian/patches/do-not-ignore-failures.patch b/debian/patches/do-not-ignore-failures.patch index 968fabc..0150c9f 100644 --- a/debian/patches/do-not-ignore-failures.patch +++ b/debian/patches/do-not-ignore-failures.patch @@ -21,7 +21,7 @@ Description: do not ignore any errors in the Makefiles @set -ex; if test -r $(LIBRARY) ; then \ cp $(LIBRARY) $(DESTDIR)$(LIBDIR); \ chmod go+r $(DESTDIR)$(LIBDIR)/$(LIBRARY); \ -@@ -326,11 +326,11 @@ install-tests: install-comp_tests +@@ -325,11 +325,11 @@ install-tests: install-comp_tests $(SETPATH) $(MAKE) -C ctests install $(SETPATH) $(MAKE) -C ftests install $(SETPATH) $(MAKE) -C validation_tests install @@ -38,7 +38,7 @@ Description: do not ignore any errors in the Makefiles # Component tests installing install-comp_tests: -@@ -342,8 +342,8 @@ endif +@@ -341,8 +341,8 @@ endif install-pkgconf: @echo "pkcongfig being installed in: \"$(DESTDIR)$(LIBPC)\""; @@ -47,8 +47,8 @@ Description: do not ignore any errors in the Makefiles + mkdir -p $(DESTDIR)$(LIBPC) + chmod go+rx $(DESTDIR)$(LIBPC) cp papi.pc $(DESTDIR)$(LIBPC)/papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc - cd $(DESTDIR)$(LIBPC); ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).pc; - cd $(DESTDIR)$(LIBPC); ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc papi-$(PAPIVER).pc; + ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi-$(PAPISOVER).pc + ln -sf papi-$(PAPIVER).$(PAPIREV).$(PAPIAGE).$(PAPIINC).pc $(DESTDIR)$(LIBPC)/papi.pc --- a/src/components/Makefile_comp_tests +++ b/src/components/Makefile_comp_tests @@ -8,14 +8,14 @@ tests: $(NAME)_tests diff --git a/debian/patches/for-debian-no-rpath.patch b/debian/patches/for-debian-no-rpath.patch index 4232ec6..b550e82 100644 --- a/debian/patches/for-debian-no-rpath.patch +++ b/debian/patches/for-debian-no-rpath.patch @@ -1,8 +1,8 @@ On Debian, we do not want an rpath for standard lib dir --- a/src/configure.in +++ b/src/configure.in -@@ -1236,7 +1236,7 @@ SHLIB='libpapi.so.AC_PACKAGE_VERSION' - VLIB='libpapi.so.$(PAPIVER)' +@@ -1266,7 +1266,7 @@ PAPISOVER='$(PAPIVER).$(PAPIREV)' + VLIB='libpapi.so.$(PAPISOVER)' OMPCFLGS=-fopenmp CC_R='$(CC) -pthread' -CC_SHR='$(CC) -fPIC -DPIC -shared -Wl,-soname -Wl,$(VLIB) -Xlinker "-rpath" -Xlinker "$(LIBDIR)"' diff --git a/debian/patches/series b/debian/patches/series index e74f3db..8e0f8eb 100644 --- a/debian/patches/series +++ b/debian/patches/series @@ -1,3 +1,5 @@ +0001-set-SONAME-to-libpapi.so.-PAPIVER-.-PAPIREV.patch +0002-Clean-up-of-carriage-return-character-M-from.patch fix-typos.patch for-debian-no-rpath.patch for-debian-do-not-embed-libpfm4.patch diff --git a/debian/rules b/debian/rules index c62fcee..7957fcc 100755 --- a/debian/rules +++ b/debian/rules @@ -3,6 +3,8 @@ # output every command that modifies files on the build system. #export DH_VERBOSE = 1 +SOVERSION = 5.7 + # see FEATURE AREAS in dpkg-buildflags(1) export DEB_BUILD_MAINT_OPTIONS = hardening=+all export DEB_LDFLAGS_MAINT_APPEND = -Wl,--as-needed @@ -59,3 +61,21 @@ override_dh_installchangelogs: override_dh_compress: dh_compress -X.c -X.h -X.F -XMakefile + +override_dh_gencontrol: + dh_gencontrol -- \ + -V'papi:SOVERSION=$(SOVERSION)' + + +TEMPLATES := $(wildcard debian/libpapiSOVERSION.*) +GENERATED = $(subst SOVERSION,$(SOVERSION),$(TEMPLATES)) + +libpapi$(SOVERSION).%: libpapiSOVERSION.% + sed 's/@SOVERSION@/$(SOVERSION)/g' $< > $@ + +build-generated: $(GENERATED) ; +clean-generated: + $(RM) $(GENERATED) + +override_dh_auto_configure: build-generated +clean: clean-generated diff --git a/debian/watch b/debian/watch index 8e70cc4..57ee4d2 100644 --- a/debian/watch +++ b/debian/watch @@ -1,3 +1,4 @@ -version=3 +version=4 +opts="dversionmangle=s/\+dfsg\d*$//,repacksuffix=+dfsg" \ https://icl.utk.edu/papi/software/index.html .*/papi-(.*)\.tar\.gz diff --git a/src/components/appio/tests/iozone/Changes.txt b/src/components/appio/tests/iozone/Changes.txt deleted file mode 100644 index a619f8b..0000000 diff --git a/src/components/appio/tests/iozone/Generate_Graphs b/src/components/appio/tests/iozone/Generate_Graphs deleted file mode 100755 index 7c14a9a..0000000 diff --git a/src/components/appio/tests/iozone/Gnuplot.txt b/src/components/appio/tests/iozone/Gnuplot.txt deleted file mode 100644 index 5ea63d8..0000000 diff --git a/src/components/appio/tests/iozone/client_list b/src/components/appio/tests/iozone/client_list deleted file mode 100644 index c3f043b..0000000 diff --git a/src/components/appio/tests/iozone/fileop.c b/src/components/appio/tests/iozone/fileop.c deleted file mode 100644 index 588a2d2..0000000 diff --git a/src/components/appio/tests/iozone/gengnuplot.sh b/src/components/appio/tests/iozone/gengnuplot.sh deleted file mode 100755 index ec1d3ee..0000000 diff --git a/src/components/appio/tests/iozone/gnu3d.dem b/src/components/appio/tests/iozone/gnu3d.dem deleted file mode 100644 index bcbf48f..0000000 diff --git a/src/components/appio/tests/iozone/gnuplot.dem b/src/components/appio/tests/iozone/gnuplot.dem deleted file mode 100644 index d1abdf5..0000000 diff --git a/src/components/appio/tests/iozone/gnuplotps.dem b/src/components/appio/tests/iozone/gnuplotps.dem deleted file mode 100644 index 39e1c71..0000000 diff --git a/src/components/appio/tests/iozone/iozone.c b/src/components/appio/tests/iozone/iozone.c deleted file mode 100644 index 7708cd7..0000000 diff --git a/src/components/appio/tests/iozone/iozone_visualizer.pl b/src/components/appio/tests/iozone/iozone_visualizer.pl deleted file mode 100755 index a7c6b13..0000000 diff --git a/src/components/appio/tests/iozone/libasync.c b/src/components/appio/tests/iozone/libasync.c deleted file mode 100644 index 4548a2c..0000000 diff --git a/src/components/appio/tests/iozone/libbif.c b/src/components/appio/tests/iozone/libbif.c deleted file mode 100644 index a69475d..0000000 diff --git a/src/components/appio/tests/iozone/makefile b/src/components/appio/tests/iozone/makefile deleted file mode 100644 index f7db172..0000000 diff --git a/src/components/appio/tests/iozone/pit_server.c b/src/components/appio/tests/iozone/pit_server.c deleted file mode 100644 index 638e2f0..0000000 diff --git a/src/components/appio/tests/iozone/read_telemetry b/src/components/appio/tests/iozone/read_telemetry deleted file mode 100644 index 1cfd252..0000000 diff --git a/src/components/appio/tests/iozone/report.pl b/src/components/appio/tests/iozone/report.pl deleted file mode 100755 index f9b9b30..0000000 diff --git a/src/components/appio/tests/iozone/spec.in b/src/components/appio/tests/iozone/spec.in deleted file mode 100644 index b385b58..0000000 diff --git a/src/components/appio/tests/iozone/write_telemetry b/src/components/appio/tests/iozone/write_telemetry deleted file mode 100644 index 8b789d1..0000000