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and subject line Bug#43372: fixed in readseq 1-1
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From: Stephane Bortzmeyer <[EMAIL PROTECTED]>
To: [EMAIL PROTECTED]
Subject: Version 2 is out
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Date: Mon, 23 Aug 1999 09:24:24 +0200
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Package: readseq
Version: 1
Severity: wishlist
Version 2 is out but, since it is completely different (written in Java and no
longer in C), may be a second package would be the best thing?
------- Forwarded Message
Date: Tue, 17 Aug 1999 11:39:18 -0500 (EST)
From: Don Gilbert <[EMAIL PROTECTED]>
Reply-To: Don Gilbert <[EMAIL PROTECTED]>
Subject: Re: questions about readseq [Re: XML output for readseq? ]
...
http://iubio.bio.indiana.edu/soft/molbio/readseq/java/
...
- -- d.gilbert--bioinformatics--indiana-u--bloomington-in-47405
- -- [EMAIL PROTECTED]
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From: Andreas Tille <[EMAIL PROTECTED]>
To: [EMAIL PROTECTED]
X-Katie: $Revision: 1.59 $
Subject: Bug#43372: fixed in readseq 1-1
Message-Id: <[EMAIL PROTECTED]>
Sender: James Troup <[EMAIL PROTECTED]>
Date: Tue, 06 Nov 2001 15:04:46 -0500
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We believe that the bug you reported is fixed in the latest version of
readseq, which has been installed in the Debian FTP archive:
readseq_1.orig.tar.gz
to pool/main/r/readseq/readseq_1.orig.tar.gz
readseq_1-1.diff.gz
to pool/main/r/readseq/readseq_1-1.diff.gz
readseq_1-1_i386.deb
to pool/main/r/readseq/readseq_1-1_i386.deb
readseq_1-1.dsc
to pool/main/r/readseq/readseq_1-1.dsc
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [EMAIL PROTECTED],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <[EMAIL PROTECTED]> (supplier of updated readseq package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [EMAIL PROTECTED])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Mon, 5 Nov 2001 08:43:12 +0100
Source: readseq
Binary: readseq
Architecture: source i386
Version: 1-1
Distribution: unstable
Urgency: low
Maintainer: Andreas Tille <[EMAIL PROTECTED]>
Changed-By: Andreas Tille <[EMAIL PROTECTED]>
Description:
readseq - [Biology] Conversion between sequence formats
Closes: 43372 100257
Changes:
readseq (1-1) unstable; urgency=low
.
* New Maintainer
closes: #100257
* New upstream release
* Applied Bugfix 20Apr93
* Applied fixes from former versions
* Added debian/translate.patch to the sources for those brave people
who want to test it (please report if I should apply it to the binary)
* Replaced a gets call by fgets to avoid buffer overflow
* increased p.namewidth from 8 to 10 in ureadseq.h because Arb need this
* Added patch by o. strunk (ARB) to allow numbers in genbank sequences
to ureadseq.c
* Added an undocumented ARB patch which seems to fix a problem with older
Phylip versions.
* Added a further patch from ARB. Patches can be undone by just
undefining ARB.
* I did not apply the patch of the ARB version which wrapped isdigit by
by rs_isdigit in readseq.c.
* Declared in README.Debian that this is the packaged version 1 of
readseq by certain reasons. Because I really need this version I
close the "new version available" bug. If somebody really wants
the new version please file an RFP bug against wnpp. Make sure
to read /usr/share/doc/readseq/README.Debian before.
closes: #43372
* Added URL to the package description because I consider this as
"good style" to have an upstream link without installing the package.
* Install Readseq.help as NCBI Vibrant Toolkit compatible helpfile
instead of just putting it just into /usr/share/doc/readseq.
Files:
8616cc5c55c6605529afcde81129765c 614 science optional readseq_1-1.dsc
3973daff73375953369c31c5c1661699 54557 science optional readseq_1.orig.tar.gz
5094ff76e89f86cb05c9ec8ad50cba10 8941 science optional readseq_1-1.diff.gz
0d7c7d690d28d45ae8e1339669f1d736 53644 science optional readseq_1-1_i386.deb
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