"make -j160" that would be my guess :)
remove parallel from the dh option, and try again (fixes symptoms) On Thu, Dec 10, 2020 at 10:49 AM Andreas Tille <ti...@debian.org> wrote: > > Control: tags -1 help > > Hi, > > I tried to investigate the situation below and my guess is that lex has > somehow problems to create the missing header files. I've found the > files in upstreams .gitignore file so these need to be created but this > does not seem to work on ppc64el (any more - since the package has build > successfully before). > > Any hint to tackle this is welcome > > Andreas. > > On Wed, Dec 09, 2020 at 09:37:42AM +0100, Lucas Nussbaum wrote: > > Source: libpll > > Version: 0.3.2-3 > > Severity: serious > > Justification: FTBFS on ppc64el > > Tags: bullseye sid ftbfs > > Usertags: ftbfs-20201209 ftbfs-bullseye ftbfs-ppc64el > > > > Hi, > > > > During a rebuild of all packages in sid, your package failed to build > > on ppc64el. At the same time, it did not fail on amd64. > > > > I'm marking this bug as severity:serious since your package currently has > > ppc64el binary packages in unstable (so this is a regression). > > > > Relevant part (hopefully): > > > /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. > > > -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE > > > -std=c99 -O3 -fPIC -g -c -o libpll_la-lex_utree.lo `test -f 'lex_utree.c' > > > || echo './'`lex_utree.c > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c fasta.c -fPIC -DPIC -o .libs/libpll_la-fasta.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c pll.c -fPIC -DPIC -o .libs/libpll_la-pll.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c likelihood.c -fPIC -DPIC -o .libs/libpll_la-likelihood.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c maps.c -fPIC -DPIC -o .libs/libpll_la-maps.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c output.c -fPIC -DPIC -o .libs/libpll_la-output.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c utree.c -fPIC -DPIC -o .libs/libpll_la-utree.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c utree_moves.c -fPIC -DPIC -o .libs/libpll_la-utree_moves.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c models.c -fPIC -DPIC -o .libs/libpll_la-models.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c parsimony.c -fPIC -DPIC -o .libs/libpll_la-parsimony.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c core_partials.c -fPIC -DPIC -o .libs/libpll_la-core_partials.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c derivatives.c -fPIC -DPIC -o .libs/libpll_la-derivatives.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c utree_svg.c -fPIC -DPIC -o .libs/libpll_la-utree_svg.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c gamma.c -fPIC -DPIC -o .libs/libpll_la-gamma.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c rtree.c -fPIC -DPIC -o .libs/libpll_la-rtree.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c list.c -fPIC -DPIC -o .libs/libpll_la-list.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c partials.c -fPIC -DPIC -o .libs/libpll_la-partials.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c compress.c -fPIC -DPIC -o .libs/libpll_la-compress.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c core_pmatrix.c -fPIC -DPIC -o .libs/libpll_la-core_pmatrix.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c core_likelihood.c -fPIC -DPIC -o .libs/libpll_la-core_likelihood.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c fast_parsimony.c -fPIC -DPIC -o .libs/libpll_la-fast_parsimony.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c core_derivatives.c -fPIC -DPIC -o > > > .libs/libpll_la-core_derivatives.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c phylip.c -fPIC -DPIC -o .libs/libpll_la-phylip.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c hardware.c -fPIC -DPIC -o .libs/libpll_la-hardware.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c random.c -fPIC -DPIC -o .libs/libpll_la-random.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c stepwise.c -fPIC -DPIC -o .libs/libpll_la-stepwise.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c lex_rtree.c -fPIC -DPIC -o .libs/libpll_la-lex_rtree.o > > > libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time > > > -D_FORTIFY_SOURCE=2 -Wall -Wsign-compare -D_GNU_SOURCE -std=c99 -O3 -fPIC > > > -g -c lex_utree.c -fPIC -DPIC -o .libs/libpll_la-lex_utree.o > > > lex_utree.l:22:10: fatal error: parse_utree.h: No such file or directory > > > 22 | #include "parse_utree.h" > > > | ^~~~~~~~~~~~~~~ > > > compilation terminated. > > > lex_rtree.l:22:10: fatal error: parse_rtree.h: No such file or directory > > > 22 | #include "parse_rtree.h" > > > | ^~~~~~~~~~~~~~~ > > > compilation terminated. > > > make[3]: *** [Makefile:873: libpll_la-lex_utree.lo] Error 1 > > > > The full build log is available from: > > http://qa-logs.debian.net/2020/12/09/libpll_0.3.2-3_unstable.log > > > > A list of current common problems and possible solutions is available at > > http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! > > > > If you reassign this bug to another package, please marking it as > > 'affects'-ing > > this package. See https://www.debian.org/Bugs/server-control#affects > > > > If you fail to reproduce this, please provide a build log and diff it with > > me > > so that we can identify if something relevant changed in the meantime. > > > > About the archive rebuild: The rebuild was done on a Power8 cluster part of > > the > > Grid'5000 testbed. Hardware specs: > > https://www.grid5000.fr/w/Grenoble:Hardware#drac > > > > _______________________________________________ > > Debian-med-packaging mailing list > > debian-med-packag...@alioth-lists.debian.net > > https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging > > -- > http://fam-tille.de >
