Hi,
I'm trying to package metabat[1] in the COVID-19 effort of the Debian
Med team. I went forward with tweaking cmake but I'm now struck with:
Installing None MetaBAT into /usr
-- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11").
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.2").
-- Checking for module 'htslib'
-- Found htslib, version 1.10.2-3
-- Found Boost: /usr/include (found suitable version "1.67.0", minimum required
is "1.55.0") found components: program_options filesystem system graph
serialization iostreams regex.
...
-- Configuring done
CMake Error at src/CMakeLists.txt:51 (add_dependencies):
The dependency target "htslib" of target "contigOverlaps" does not exist.
CMake Error at src/CMakeLists.txt:51 (add_dependencies):
The dependency target "zlib" of target "contigOverlaps" does not exist.
CMake Error at src/CMakeLists.txt:51 (add_dependencies):
The dependency target "htslib" of target "jgi_summarize_bam_contig_depths"
does not exist.
CMake Error at src/CMakeLists.txt:51 (add_dependencies):
The dependency target "zlib" of target "jgi_summarize_bam_contig_depths"
does not exist.
CMake Error at src/CMakeLists.txt:39 (add_dependencies):
The dependency target "htslib" of target "metabat2" does not exist.
CMake Error at src/CMakeLists.txt:39 (add_dependencies):
The dependency target "zlib" of target "metabat2" does not exist.
CMake Error at src/CMakeLists.txt:39 (add_dependencies):
The dependency target "htslib" of target "metabat1" does not exist.
CMake Error at src/CMakeLists.txt:39 (add_dependencies):
The dependency target "zlib" of target "metabat1" does not exist.
...
This is strange since in the beginning zlib and htslib were found
due to the means I did. Any hint would be welcome.
Kind regards
Andreas.
[1] https://salsa.debian.org/med-team/metabat
--
http://fam-tille.de
