Dear Debian Med, I hope it's ok for me to suggest packaging some of my software: https://github.com/mcfrith/dnarrange https://gitlab.com/mcfrith/lamassemble
dnarrange has actually been used for health care, e.g. here: https://pubmed.ncbi.nlm.nih.gov/33510365/ https://pubmed.ncbi.nlm.nih.gov/32731881/ https://pubmed.ncbi.nlm.nih.gov/32296131/ I noticed that you already have tandem-genotypes. One component of tandem-genotypes (and also dnarrange) depends on lamassemble. Have a nice day, Martin https://sites.google.com/site/mcfrith/
