Hi Andreas Back in June you were trying to package psortb and faced some issues. At the time I mentioned that psortb was using a vendorised and modified implementation of Algorithm::SVM (PSort::SVMLoc). In addition, they were also dependent on the original implementation [1]:
> But despite having Bio::Tools::PSort::SVMLoc, psortb also uses the > 'wild type' Algorithm::SVM: > > $ grep -r 'use Algorithm::SVM' psortb > psortb/lib/Bio/Tools/SVMLoc.pm:use Algorithm::SVM::DataSet; > psortb/lib/Bio/Tools/SVMLoc.pm:use Algorithm::SVM; > > which means that after fixing whatever issues there are in psortb, it > will still need to be dependent on libalgorithm-svm-perl that I just > packaged. I have just finished sorting out the last issue with libalgorithm-svm-perl in the perl team and asked to have it uploaded. I noticed that psortb is now on sid. However, that package seems to be broken. Not only it is missing libalgorithm-svm-perl it seems to be missing a bunch of other dependencies. I have enabled autopkgtest on it [2, 3] which will test each of the modules and will list the missing modules. Cheers, Carnë [1] https://lists.debian.org/debian-perl/2017/04/msg00023.html [2] https://github.com/carandraug/debian-psortb [3] https://github.com/carandraug/debian-psortb/commit/456b24d809
