Hi Daniel,
On Tue, Oct 11, 2016 at 07:47:48PM +0200, Daniel Huson wrote:
> Dear Andreas,
>
> sorry, I got side-tracked, but now the repository is open
Thanks for the good news. Could you please do us some favour and tag
the current version. When looking at
$ cat tex/manual/versioninfo.tex
\def\VERSION{{0.3.6}}
it seems the current MALT is version 0.3.6 - it would be great if this
would be reflected in tags at Github since this enables us detecting new
versions easily.
For those who want to tackle the packaging: I created some preliminary
packaging stuff in Git[1]. Anybody should feel free to continue from
here (possibly also in a MoM project).
Kind regards
Andreas.
[1] https://anonscm.debian.org/git/debian-med/malt.git
> > On Sep 16, 2016, at 21:38, Andreas Tille <[email protected]> wrote:
> >
> > Dear Daniel,
> >
> > thanks for the clarification and good luck for the publication.
> >
> > Kind regards
> >
> > Andreas.
> >
> > On Fri, Sep 16, 2016 at 05:35:13PM +0200, Daniel Huson wrote:
> >> Dear Andreas,
> >>
> >> I will open the github repository for MALT within the next few days. There
> >> are a couple of things that I need to clean up first.
> >>
> >> (I was going to wait until our paper that is under review and has been
> >> accepted for publication, iif it is not good enough for publication then
> >> it is not good enough for open source…)
> >>
> >> Best wishes
> >> daniel
> >>
> >>
> >>
> >>> On Sep 16, 2016, at 16:13, Andreas Tille <[email protected]> wrote:
> >>>
> >>> Dear Prof. Dr. Daniel Huson,
> >>>
> >>> as far as I can see there was no response to the mail from Jihyeok about
> >>> the availability of the source code for MALT. It would be really great if
> >>> you could possibly forward the question to the people in charge to enable
> >>> us packaging MALT and MEGAN for Debian since this makes the installation
> >>> for users quite simple.
> >>>
> >>> Kind regards
> >>>
> >>> Andreas.
> >>>
> >>> On Wed, Aug 03, 2016 at 07:06:40PM +0900, Jihyeok Seo wrote:
> >>>> Dear Prof. Dr. Daniel Huson,
> >>>>
> >>>> I’m writing to you on behalf of the Debian Med team which is a subgroup
> >>>> inside Debian with the objective to package free software in the field
> >>>> of biology and medicine. You can see the packages we worked on in the
> >>>> field of bioinformatics on our so-called tasks list[1].
> >>>>
> >>>> While packaging MEGAN Community Edition[2], we hit a roadblock because
> >>>> we were unable to find the source code for MEGAN alignment tool[3].
> >>>> Please provide source code for MALT on a public place, so we may
> >>>> continue packaging MEGAN.
> >>>>
> >>>> Kind regards and thank you for choosing a free license,
> >>>> Jihyeok
> >>>>
> >>>> [1]: https://blends.debian.org/med/tasks/bio
> >>>> [2]: https://github.com/danielhuson/megan-ce/
> >>>> [3]:
> >>>> http://ab.inf.uni-tuebingen.de/data/software/malt/download/welcome.html
> >>>>
> >>>
> >>> --
> >>> http://fam-tille.de
> >>
> >> —
> >> Daniel Huson, Professor of Algorithms in Bioinformatics,
> >> University of Tuebingen, Center for Bioinformatics (ZBIT), Department of
> >> Computer Science
> >> Sand 14, 72076 Tuebingen, Germany, Tel: +49 7071 2970450 Fax: +49 7071
> >> 295148
> >> [email protected] <mailto:[email protected]>
> >> <mailto:[email protected]
> >> <mailto:[email protected]>>,
> >> www-ab.informatik.uni-tuebingen.de
> >> <http://www-ab.informatik.uni-tuebingen.de/>
> >> <http://www-ab.informatik.uni-tuebingen.de/
> >> <http://www-ab.informatik.uni-tuebingen.de/>>
> >>
> >>
> >>
> >>
> >>
> >>
> >>
> >
> > --
> > http://fam-tille.de <http://fam-tille.de/>
> —
> Daniel Huson, Professor of Algorithms in Bioinformatics,
> University of Tuebingen, Center for Bioinformatics (ZBIT), Department of
> Computer Science
> Sand 14, 72076 Tuebingen, Germany, Tel: +49 7071 2970450 Fax: +49 7071 295148
> [email protected] <mailto:[email protected]>,
> www-ab.informatik.uni-tuebingen.de
> <http://www-ab.informatik.uni-tuebingen.de/>
>
>
>
>
>
>
>
--
http://fam-tille.de
