>Dear Maintainer,
>
>Tophat 2.0.13 started to include a convience copy of samtools 0.1.18,
>I believe
>this is technically a violation of Debian policy. Though I'm not sure
>how hard
>it would be properly fix the issue.
>
>Diane Trout
Hi Diane,
Please see this thread for more details:
https://lists.debian.org/debian-med/2014/10/msg00004.html
Until we have a solution we need to ship samtools 0.1.18 with tophat.
Regards,
Alex
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