Hi, just to let you know that your patch updates are fine and I could build the package There is still an issue I need to fix about embedded libraries (bzip2 and pcre3) and I should be able to push to experimental (waiting for en d of freeze).
Thanks again Olivier Le Wed Dec 03 2014 at 6:37:04 AM, Aaron M. Ucko <u...@debian.org> a écrit : > olivier sallou <olivier.sal...@gmail.com> writes: > > > I have updated patches to the new version of blast+, however I have a > > compilation error. > > Thanks for working on packaging the latest release! I was able to get > the build to complete by means of two additions to > debian/patches/fix_lib_deps: > > * src/build-system/library_relations.txt: Change xblast's relation to > blast from includes to needs, per preexisting changes necessary to > avoid a circular dependency between xblast and xalgoblastdbindex. > > * src/objtools/data_loaders/genbank/Makefile.ncbi_xloader_genbank.lib: > Add missing DLL_DLIB entries. > > NB: The latter change requires reinstating the use of Makefile.flat, > which my system had no trouble producing. However, my usual build > environment is anything but minimal, and I've been having some trouble > recreating a new minimal environment in which to investigate your > earlier report. If you're still having trouble producing Makefile.flat, > please send your build log. > > I'm attaching the version of fix_lib_deps that works for me. > > -- > Aaron M. Ucko, KB1CJC (amu at alum.mit.edu, ucko at debian.org) > http://www.mit.edu/~amu/ | http://stuff.mit.edu/cgi/ > finger/?a...@monk.mit.edu > >
