Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
5f414e2a by Andreas Tille at 2021-02-05T13:42:19+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,34 +1,35 @@
-Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
+Last-Update: Fri, 05 Feb 2021 13:42:04 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 178 | {imaging,covid-19}
|
+ dcmtk | 180 | {imaging,covid-19}
|
orthanc | 95 | {practice,imaging,covid-19}
|
orthanc-wsi | 52 |
{laboratory,practice,his,oncology,covid-19,imaging} |
dicom3tools | 34 | {imaging}
|
- gdcm | 33 | {imaging-dev}
|
- amide | 30 | {imaging}
|
+ gdcm | 31 | {imaging-dev}
|
+ amide | 29 | {imaging}
|
htsjdk | 28 | {bio-dev}
|
- gdcm | 24 | {imaging,covid-19}
|
- dicomscope | 23 | {imaging}
|
- dcm2niix | 22 | {imaging}
|
- nifticlib | 19 | {imaging}
|
+ dicomscope | 24 | {imaging}
|
+ gdcm | 23 | {imaging,covid-19}
|
+ dcm2niix | 20 | {imaging}
|
odin | 19 | {imaging,imaging-dev}
|
+ nifticlib | 18 | {imaging}
|
plastimatch | 16 | {imaging}
|
dicomnifti | 15 | {imaging}
|
- gnumed-server | 15 | {covid-19,practice}
|
+ gnumed-server | 14 | {covid-19,practice}
|
minc-tools | 14 | {imaging}
|
pixelmed | 13 | {imaging}
|
gdcm | 12 | {imaging-dev}
|
king | 12 | {imaging,typesetting}
|
openslide | 11 | {imaging}
|
+ adun.app | 10 | {bio}
|
ngs-sdk | 10 | {bio-dev}
|
- adun.app | 9 | {bio}
|
insighttoolkit4 | 9 | {imaging-dev}
|
+ invesalius | 9 | {imaging}
|
jebl2 | 9 | {bio-dev}
|
+ vtk-dicom | 9 | {imaging}
|
biojava-live | 8 | {bio-dev}
|
ea-utils | 8 | {bio}
|
- invesalius | 8 | {imaging}
|
librg-utils-perl | 8 | {bio}
|
mia | 8 | {imaging}
|
mipe | 8 | {bio,cloud}
|
@@ -36,7 +37,6 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
ngs-sdk | 8 | {bio-dev}
|
nifti2dicom | 8 | {imaging}
|
prime-phylo | 8 | {bio,cloud}
|
- vtk-dicom | 8 | {imaging}
|
biomaj3-cli | 7 | {cloud}
|
bio-tradis | 7 | {bio,bio-dev}
|
fastlink | 7 | {bio,cloud}
|
@@ -49,7 +49,6 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
pymia | 7 | {imaging-dev}
|
runcircos-gui | 7 | {bio}
|
tracetuner | 7 | {bio}
|
- bamkit | 6 | {covid-19,bio}
|
beast-mcmc | 6 | {bio-phylogeny,bio}
|
bitseq | 6 | {bio}
|
ecopcr | 6 | {bio}
|
@@ -61,18 +60,16 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
melting | 6 | {bio,cloud}
|
perm | 6 | {cloud,bio}
|
phast | 6 | {bio}
|
- rambo-k | 6 | {bio}
|
saint | 6 | {bio}
|
- seqsero | 6 | {bio}
|
spread-phy | 6 | {bio,bio-phylogeny}
|
staden | 6 | {bio}
|
treeview | 6 | {bio-phylogeny,bio}
|
+ anfo | 5 | {cloud,bio}
|
bart-view | 5 | {imaging}
|
brig | 5 | {bio}
|
busco | 5 | {covid-19,bio}
|
clonalorigin | 5 | {bio}
|
cufflinks | 5 | {cloud,bio}
|
- libminc | 5 | {imaging-dev}
|
libpal-java | 5 | {bio-dev}
|
librdp-taxonomy-tree-java | 5 | {bio-dev}
|
libsbml | 5 | {bio-dev}
|
@@ -82,21 +79,26 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
pscan-chip | 5 | {bio}
|
qcumber | 5 | {bio}
|
quorum | 5 | {bio}
|
+ rambo-k | 5 | {bio}
|
rdp-alignment | 5 | {bio}
|
rdp-classifier | 5 | {bio}
|
- anfo | 4 | {cloud,bio}
|
+ salmid | 5 | {bio}
|
+ salmon | 5 | {covid-19,bio}
|
+ seqsero | 5 | {bio}
|
arden | 4 | {bio,cloud}
|
assemblytics | 4 | {bio}
|
+ bamkit | 4 | {covid-19,bio}
|
canu | 4 | {bio}
|
dicompyler | 4 | {oncology}
|
elastix | 4 | {imaging}
|
embassy-domalign | 4 | {cloud,bio}
|
fastml | 4 | {bio}
|
+ hinge | 4 | {bio}
|
jmodeltest | 4 | {bio,bio-phylogeny}
|
libdivsufsort | 4 | {bio-dev}
|
+ libminc | 4 | {imaging-dev}
|
mhap | 4 | {bio,bio-ngs}
|
microbegps | 4 | {bio}
|
- ngs-sdk | 4 | {bio-dev}
|
orthanc-mysql | 4 | {imaging}
|
orthanc-postgresql | 4 | {imaging}
|
paraclu | 4 | {bio,cloud}
|
@@ -104,8 +106,6 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
phyutility | 4 | {bio,cloud}
|
proalign | 4 | {bio,bio-phylogeny}
|
rtax | 4 | {bio,cloud}
|
- salmid | 4 | {bio}
|
- salmon | 4 | {covid-19,bio}
|
sibsim4 | 4 | {cloud,bio}
|
sight | 4 | {imaging}
|
soapsnp | 4 | {bio}
|
@@ -121,10 +121,9 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
delly | 3 | {bio,covid-19}
|
fsm-lite | 3 | {bio}
|
getdata | 3 | {bio}
|
- hinge | 3 | {bio}
|
ipig | 3 | {bio}
|
logol | 3 | {bio}
|
- nifticlib | 3 | {imaging-dev}
|
+ ngs-sdk | 3 | {bio-dev}
|
placnet | 3 | {bio}
|
plasmidseeker | 3 | {bio}
|
samblaster | 3 | {covid-19,bio}
|
@@ -140,6 +139,7 @@ Last-Update: Fri, 05 Feb 2021 01:42:04 +0000
gatb-core | 2 | {bio}
|
libmuscle | 2 | {bio-dev}
|
metaphlan2 | 2 | {bio}
|
+ nifticlib | 2 | {imaging-dev}
|
openslide | 2 | {imaging-dev}
|
oscar | 2 | {data,tools,practice}
|
python-bcbio-gff | 2 | {bio-dev}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5f414e2a258c4dd887d248164f0b4139a320f408
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/5f414e2a258c4dd887d248164f0b4139a320f408
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