Nilesh Patra pushed to branch master at Debian Med / lighter
Commits: 06effb7b by Nilesh Patra at 2020-11-15T23:01:25+05:30 Add test data - multi-orig tarball - - - - - e7675598 by Nilesh Patra at 2020-11-15T23:04:12+05:30 New upstream version 1.1.2 - - - - - b45f06e0 by Nilesh Patra at 2020-11-15T23:04:31+05:30 Update upstream source from tag 'upstream/1.1.2' Update to upstream version '1.1.2' with Debian dir 082d56e4ae3d0c26df77fd678344918e581a12a6 - - - - - cc6a66ce by Nilesh Patra at 2020-11-15T23:14:54+05:30 Add autopkgtests - - - - - 584c65eb by Nilesh Patra at 2020-11-15T23:15:28+05:30 Update changelog - - - - - 6 changed files: - − .gitignore - + debian-tests-data/sequence.fasta - debian/changelog - + debian/gbp.conf - + debian/tests/control - + debian/tests/run-unit-test Changes: ===================================== .gitignore deleted ===================================== @@ -1,2 +0,0 @@ -*.o -lighter \ No newline at end of file ===================================== debian-tests-data/sequence.fasta ===================================== The diff for this file was not included because it is too large. ===================================== debian/changelog ===================================== @@ -1,3 +1,10 @@ +lighter (1.1.2-4) unstable; urgency=medium + + * Add test data - multi-orig tarball + * Add autopkgtests + + -- Nilesh Patra <[email protected]> Sun, 15 Nov 2020 23:14:58 +0530 + lighter (1.1.2-3) unstable; urgency=medium [ Helmut Grohne ] ===================================== debian/gbp.conf ===================================== @@ -0,0 +1,4 @@ +[DEFAULT] +pristine-tar=True +filter=[ '.gitignore', '.travis.yml', '.git*' ] +component=['debian-tests-data'] ===================================== debian/tests/control ===================================== @@ -0,0 +1,3 @@ +Tests: run-unit-test +Depends: @ +Restrictions: allow-stderr ===================================== debian/tests/run-unit-test ===================================== @@ -0,0 +1,21 @@ +#!/bin/bash +set -e + +pkg="lighter" +CUR_DIR=`pwd` + +if [ "$AUTOPKGTEST_TMP" = "" ] ; then + AUTOPKGTEST_TMP=`mktemp -d /tmp/${pkg}-test.XXXXXX` + trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM +fi + +cp -a ${CUR_DIR}/debian-tests-data/* $AUTOPKGTEST_TMP + +cd $AUTOPKGTEST_TMP +gunzip -r * + +echo "Test functionality" +lighter -r sequence.fasta -k 17 5000000 0.1 -t 10 +[ -s sequence.cor.fa ] || exit 1 +echo "=======================================" +echo "PASS" View it on GitLab: https://salsa.debian.org/med-team/lighter/-/compare/b8c44ba2e4386fbfcf5e4cedb4f116dee1d3ff80...584c65eb1e6528b17282c1d4748ea09be6c5fc37 -- View it on GitLab: https://salsa.debian.org/med-team/lighter/-/compare/b8c44ba2e4386fbfcf5e4cedb4f116dee1d3ff80...584c65eb1e6528b17282c1d4748ea09be6c5fc37 You're receiving this email because of your account on salsa.debian.org.
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