Steffen Möller pushed to branch master at Debian Med / ivar
Commits:
8e3d1bc7 by Steffen Moeller at 2020-06-16T19:22:30+02:00
Cosmetics while sponsoring.
- - - - -
3 changed files:
- debian/changelog
- debian/rules
- debian/upstream/metadata
Changes:
=====================================
debian/changelog
=====================================
@@ -1,5 +1,6 @@
-ivar (1.2.2+dfsg-3) UNRELEASED; urgency=medium
+ivar (1.2.2+dfsg-3) unstable; urgency=medium
+ * Team upload.
* Add reference data for autopkgtests
* Add recommended package as per docs
* Add autopkgtests
=====================================
debian/rules
=====================================
@@ -7,3 +7,7 @@ export DEB_BUILD_MAINT_OPTIONS=hardening=+all
%:
dh $@
+
+override_dh_auto_clean:
+ rm -f data/db/test_ref.fa.fai data/test.gap.fa data/test.gap.qual.txt
data/test.indel.tsv data/test.masked_primer_indices.txt
data/test.trimmed.masked.bam data/test.trimmed.masked.bam.bai
data/test.trimmed.sorted.bam.bai data/test.unmapped.sorted.bam.bai
+
=====================================
debian/upstream/metadata
=====================================
@@ -1,26 +1,28 @@
Bug-Database: https://github.com/andersen-lab/ivar/issues
Bug-Submit: https://github.com/andersen-lab/ivar/issues/new
Reference:
- Author: >
+ - Author: >
Nathan D. Grubaugh and Karthik Gangavarapu and Joshua Quick and
Nathaniel L. Matteson and Jaqueline Goes De Jesus and Bradley J. Main and
Amanda L. Tan and Lauren M. Paul and Doug E. Brackney and
Saran Grewal and Nikos Gurfield and Koen K. A. Van Rompay and
Sharon Isern and Scott F. Michael and Lark L. Coffey and
- Nicholas J. Loman and Kristian G. Andersen
- Title: >
+ Nicholas J. Loman and Kristian G. Andersen
+ Title: >
An amplicon-based sequencing framework for accurately measuring intrahost
virus diversity using PrimalSeq and iVar
- Journal: Genome Biology
- Year: 2019
- Volume: 20
- Number: 1
- Pages: 8
- DOI: 10.1186/s13059-018-1618-7
- PMID: 30621750
- PMCID: PMC6325816
- URL:
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1618-7
- eprint:
https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-018-1618-7
+ Journal: Genome Biology
+ Year: 2019
+ Volume: 20
+ Number: 1
+ Pages: 8
+ DOI: 10.1186/s13059-018-1618-7
+ PMID: 30621750
+ PMCID: PMC6325816
+ URL: >
+ https://genomebiology.biomedcentral.com/articles/10.1186/s13059-018-1618-7
+ eprint: >
+ https://genomebiology.biomedcentral.com/track/pdf/10.1186/s13059-018-1618-7
Registry:
- Name: conda:bioconda
Entry: ivar
View it on GitLab:
https://salsa.debian.org/med-team/ivar/-/commit/8e3d1bc7cea5a5d17cc98f9ab4a1525d2a6638b9
--
View it on GitLab:
https://salsa.debian.org/med-team/ivar/-/commit/8e3d1bc7cea5a5d17cc98f9ab4a1525d2a6638b9
You're receiving this email because of your account on salsa.debian.org.
_______________________________________________
debian-med-commit mailing list
[email protected]
https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
