Andreas Tille pushed to branch master at Debian Med / cat-bat
Commits: c4dd24ad by Andreas Tille at 2020-05-27T13:26:43+02:00 New upstream version 5.0.5 - - - - - 6254575d by Andreas Tille at 2020-05-27T13:26:43+02:00 routine-update: New upstream version - - - - - 75de3c8a by Andreas Tille at 2020-05-27T13:26:43+02:00 Update upstream source from tag 'upstream/5.0.5' Update to upstream version '5.0.5' with Debian dir fdbff0efba49ce98c46a67c38ceb0266a834d44e - - - - - 55921d63 by Andreas Tille at 2020-05-27T13:26:44+02:00 routine-update: debhelper-compat 13 - - - - - 4a5ec638 by Andreas Tille at 2020-05-27T13:26:47+02:00 routine-update: Rules-Requires-Root: no - - - - - 6046a68a by Andreas Tille at 2020-05-27T13:26:53+02:00 Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. Fixes: lintian: upstream-metadata-missing-bug-tracking See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html Fixes: lintian: upstream-metadata-missing-repository See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html - - - - - 3ce2bea0 by Andreas Tille at 2020-05-27T13:27:49+02:00 routine-update: Ready to upload to unstable - - - - - 7 changed files: - CAT_pack/about.py - CAT_pack/bins.py - CAT_pack/check.py - CHANGELOG.md - debian/changelog - debian/control - debian/upstream/metadata Changes: ===================================== CAT_pack/about.py ===================================== @@ -1,5 +1,5 @@ #!/usr/bin/env python3 __author__ = 'F. A. Bastiaan von Meijenfeldt' -__version__ = '5.0.4' -__date__ = 'March 18, 2020' +__version__ = '5.0.5' +__date__ = 'May 26, 2020' ===================================== CAT_pack/bins.py ===================================== @@ -236,6 +236,10 @@ def import_bins(bin_folder, contig_names = set() for file_ in os.listdir(bin_folder): + if file_.startswith('.'): + # Skip hidden files. + continue + if not file_.endswith(bin_suffix): continue ===================================== CAT_pack/check.py ===================================== @@ -232,6 +232,10 @@ def check_bin_folder(bin_folder, bin_suffix, log_file, quiet): tmp = [] for file_ in os.listdir(bin_folder): + if file_.startswith('.'): + # Skip hidden files. + continue + if not file_.endswith(bin_suffix): continue ===================================== CHANGELOG.md ===================================== @@ -1,5 +1,8 @@ # Changelog +## 5.0.5. +Skip hidden files in bin folder. + ## 5.0.4. We have added the `--no_stars` flag alongside a minor bug fix. ===================================== debian/changelog ===================================== @@ -1,3 +1,13 @@ +cat-bat (5.0.5-1) unstable; urgency=medium + + * New upstream version + * debhelper-compat 13 (routine-update) + * Rules-Requires-Root: no (routine-update) + * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, + Repository-Browse. + + -- Andreas Tille <[email protected]> Wed, 27 May 2020 13:26:54 +0200 + cat-bat (5.0.4-1) unstable; urgency=medium * Initial release (Closes: #960937) ===================================== debian/control ===================================== @@ -3,13 +3,14 @@ Maintainer: Debian Med Packaging Team <[email protected]. Uploaders: Andreas Tille <[email protected]> Section: science Priority: optional -Build-Depends: debhelper-compat (= 12), +Build-Depends: debhelper-compat (= 13), dh-python, python3 Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/cat-bat Vcs-Git: https://salsa.debian.org/med-team/cat-bat.git Homepage: https://github.com/dutilh/CAT +Rules-Requires-Root: no Package: cat-bat Architecture: any ===================================== debian/upstream/metadata ===================================== @@ -1,3 +1,5 @@ +Bug-Database: https://github.com/dutilh/CAT/issues +Bug-Submit: https://github.com/dutilh/CAT/issues/new Reference: Author: > F. A. Bastiaan von Meijenfeldt and Ksenia Arkhipova and Diego D. Cambuy @@ -18,3 +20,5 @@ Reference: Registry: - Name: conda:bioconda Entry: cat +Repository: https://github.com/dutilh/CAT.git +Repository-Browse: https://github.com/dutilh/CAT View it on GitLab: https://salsa.debian.org/med-team/cat-bat/-/compare/d88bd6803ccabda697f75d0ab33e2cc2b4fb510c...3ce2bea04d1f50bbc999b6fb6cf5e2493ca68954 -- View it on GitLab: https://salsa.debian.org/med-team/cat-bat/-/compare/d88bd6803ccabda697f75d0ab33e2cc2b4fb510c...3ce2bea04d1f50bbc999b6fb6cf5e2493ca68954 You're receiving this email because of your account on salsa.debian.org.
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