Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
79fde132 by Andreas Tille at 2020-05-18T13:45:09+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,35 +1,35 @@
-Last-Update: Mon, 18 May 2020 01:42:04 +0000
+Last-Update: Mon, 18 May 2020 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 190 | {imaging,covid-19}
|
+ dcmtk | 189 | {imaging,covid-19}
|
orthanc | 96 | {imaging,covid-19,practice}
|
gdcm | 54 | {imaging-dev}
|
orthanc-wsi | 47 |
{oncology,practice,laboratory,his,imaging,covid-19} |
- htsjdk | 32 | {bio-dev}
|
+ htsjdk | 31 | {bio-dev}
|
+ dicom3tools | 30 | {imaging}
|
dicomscope | 30 | {imaging}
|
- dicom3tools | 29 | {imaging}
|
dcm2niix | 22 | {imaging}
|
- gdcm | 18 | {covid-19,imaging}
|
+ gdcm | 19 | {covid-19,imaging}
|
gnumed-server | 16 | {practice,covid-19}
|
- pixelmed | 15 | {imaging}
|
+ pixelmed | 16 | {imaging}
|
+ minc-tools | 15 | {imaging}
|
insighttoolkit4 | 14 | {imaging-dev}
|
- minc-tools | 14 | {imaging}
|
+ invesalius | 14 | {imaging}
|
plastimatch | 14 | {imaging}
|
- invesalius | 13 | {imaging}
|
ngs-sdk | 13 | {bio-dev}
|
+ openslide | 13 | {imaging}
|
+ vtk-dicom | 13 | {imaging}
|
adun.app | 12 | {bio}
|
- openslide | 12 | {imaging}
|
- vtk-dicom | 12 | {imaging}
|
- king | 11 | {typesetting,imaging}
|
+ king | 12 | {typesetting,imaging}
|
stacks | 11 | {bio}
|
- biojava-live | 10 | {bio-dev}
|
+ biosig4c++ | 10 | {imaging,physics}
|
gdcm | 10 | {imaging-dev}
|
- jebl2 | 10 | {bio-dev}
|
- biosig4c++ | 9 | {imaging,physics}
|
+ biojava-live | 9 | {bio-dev}
|
+ jebl2 | 9 | {bio-dev}
|
librg-utils-perl | 9 | {bio}
|
- obitools | 9 | {bio}
|
ngs-sdk | 8 | {bio-dev}
|
+ obitools | 8 | {bio}
|
alter-sequence-alignment | 7 | {bio}
|
ea-utils | 7 | {bio}
|
fastlink | 7 | {bio,cloud}
|
@@ -62,8 +62,7 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
edtsurf | 5 | {bio}
|
embassy-domainatrix | 5 | {cloud,bio}
|
embassy-domalign | 5 | {bio,cloud}
|
- libgff | 5 | {bio-dev}
|
- libsbml | 5 | {bio-dev}
|
+ libminc | 5 | {imaging-dev}
|
nutsqlite | 5 | {tools}
|
orthanc-postgresql | 5 | {imaging}
|
predictprotein | 5 | {bio}
|
@@ -83,7 +82,6 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
embassy-domsearch | 4 | {bio,cloud}
|
gasic | 4 | {cloud,bio}
|
gatb-core | 4 | {bio}
|
- harvest-tools | 4 | {bio}
|
ipig | 4 | {bio}
|
jaligner | 4 | {bio}
|
jellyfish1 | 4 | {bio}
|
@@ -91,15 +89,15 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
king-probe | 4 | {bio}
|
lagan | 4 | {bio}
|
libdivsufsort | 4 | {bio-dev}
|
- libminc | 4 | {imaging-dev}
|
+ libgff | 4 | {bio-dev}
|
libpal-java | 4 | {bio-dev}
|
+ libsbml | 4 | {bio-dev}
|
mapsembler2 | 4 | {cloud,bio}
|
mrs | 4 | {bio}
|
neobio | 4 | {cloud,bio}
|
paml | 4 | {bio}
|
paraclu | 4 | {cloud,bio}
|
phast | 4 | {bio}
|
- phybin | 4 | {bio}
|
phyutility | 4 | {cloud,bio}
|
proalign | 4 | {bio,bio-phylogeny}
|
probabel | 4 | {cloud,bio}
|
@@ -109,12 +107,10 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
rdp-readseq | 4 | {bio}
|
repeatmasker-recon | 4 | {bio}
|
saint | 4 | {bio}
|
- scythe | 4 | {bio}
|
seqtools | 4 | {bio}
|
sickle | 4 | {bio}
|
spread-phy | 4 | {bio-phylogeny,bio}
|
squizz | 4 | {cloud,bio}
|
- srf | 4 | {bio-dev}
|
zalign | 4 | {bio,cloud}
|
assemblytics | 3 | {bio}
|
baitfisher | 3 | {bio}
|
@@ -132,6 +128,7 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
fastml | 3 | {bio}
|
freebayes | 3 | {covid-19,bio}
|
fsm-lite | 3 | {bio}
|
+ harvest-tools | 3 | {bio}
|
kma | 3 | {bio}
|
libncl | 3 | {bio}
|
librdp-taxonomy-tree-java | 3 | {bio-dev}
|
@@ -140,6 +137,7 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
microbegps | 3 | {bio}
|
murasaki | 3 | {bio}
|
perm | 3 | {bio,cloud}
|
+ phybin | 3 | {bio}
|
placnet | 3 | {bio}
|
poretools | 3 | {bio}
|
prime-phylo | 3 | {cloud,bio}
|
@@ -149,6 +147,7 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
rdp-classifier | 3 | {bio}
|
roguenarok | 3 | {bio}
|
runcircos-gui | 3 | {bio}
|
+ scythe | 3 | {bio}
|
segemehl | 3 | {bio}
|
seqtools | 3 | {bio}
|
sga | 3 | {bio}
|
@@ -156,6 +155,7 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
soapaligner | 3 | {bio}
|
soapsnp | 3 | {bio}
|
sprai | 3 | {bio}
|
+ srf | 3 | {bio-dev}
|
atropos | 2 | {bio}
|
biosig4c++ | 2 | {physics,imaging-dev}
|
biosig4c++ | 2 | {imaging-dev,physics}
|
@@ -178,7 +178,6 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
mlv-smile | 2 | {bio,cloud}
|
mptp | 2 | {bio}
|
nanook | 2 | {bio}
|
- ngs-sdk | 2 | {bio-dev}
|
openslide | 2 | {imaging-dev}
|
oscar | 2 | {practice,tools,data}
|
patman | 2 | {bio}
|
@@ -216,6 +215,7 @@ Last-Update: Mon, 18 May 2020 01:42:04 +0000
libxdf | 1 | {imaging-dev}
|
mencal | 1 | {tools}
|
ncbi-vdb | 1 | {bio-dev}
|
+ ngs-sdk | 1 | {bio-dev}
|
opensurgsim | 1 | {imaging-dev}
|
pal2nal | 1 | {bio}
|
papyrus | 1 | {imaging-dev}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/79fde132cf5059f8d92f465fd99c7b63503a5cfe
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/79fde132cf5059f8d92f465fd99c7b63503a5cfe
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