Nilesh Patra pushed to branch master at Debian Med / freecontact
Commits: 2471317e by Nilesh Patra at 2020-05-14T16:41:59+05:30 Add autopkgtests - - - - - 5a489285 by Nilesh Patra at 2020-05-14T16:43:39+05:30 Drop un-necessary uupdate - - - - - 264f9d70 by Nilesh Patra at 2020-05-14T11:17:04+00:00 routine-update: Standards-Version: 4.5.0 - - - - - b40c08fa by Nilesh Patra at 2020-05-14T11:17:04+00:00 routine-update: debhelper-compat 12 - - - - - 56cc6b09 by Nilesh Patra at 2020-05-14T11:17:16+00:00 R-U: Trailing whitespace in debian/copyright - - - - - 74828e5e by Nilesh Patra at 2020-05-14T11:18:24+00:00 routine-update: Add salsa-ci file - - - - - 46d2dad0 by Nilesh Patra at 2020-05-14T17:11:55+05:30 Add "Rules-Requires-Root:no" - - - - - 8 changed files: - debian/changelog - − debian/compat - debian/control - debian/copyright - + debian/salsa-ci.yml - + debian/tests/control - + debian/tests/run-unit-test - debian/watch Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,13 @@ +freecontact (1.0.21-8) UNRELEASED; urgency=medium + + * Team upload. + * Standards-Version: 4.5.0 (routine-update) + * debhelper-compat 12 (routine-update) + * Remove trailing whitespace in debian/copyright (routine-update) + * Add salsa-ci file (routine-update) + + -- Nilesh Patra <[email protected]> Thu, 14 May 2020 11:17:04 +0000 + freecontact (1.0.21-7) unstable; urgency=medium * Fix d-shlibmove override to fit gcc-8 ===================================== debian/compat deleted ===================================== @@ -1 +0,0 @@ -11 ===================================== debian/control ===================================== @@ -4,7 +4,7 @@ Uploaders: Laszlo Kajan <[email protected]>, Andreas Tille <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 11~), +Build-Depends: debhelper-compat (= 12), bash-completion, d-shlibs, gfortran, @@ -17,10 +17,11 @@ Build-Depends: debhelper (>= 11~), perl, xsdcxx Build-Depends-Indep: doxygen -Standards-Version: 4.1.5 +Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/freecontact Vcs-Git: https://salsa.debian.org/med-team/freecontact.git Homepage: http://rostlab.org/ +Rules-Requires-Root: no Package: freecontact Architecture: any ===================================== debian/copyright ===================================== @@ -23,12 +23,12 @@ License: GPL-3+ it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. - . + . This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. - . + . You should have received a copy of the GNU General Public License along with this program. If not, see <http://www.gnu.org/licenses/>. . ===================================== debian/salsa-ci.yml ===================================== @@ -0,0 +1,4 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml ===================================== debian/tests/control ===================================== @@ -0,0 +1,4 @@ +Tests: run-unit-test +Depends: @ +Restrictions: allow-stderr + ===================================== debian/tests/run-unit-test ===================================== @@ -0,0 +1,24 @@ +#!/bin/bash +set -e + +pkg=freecontact + +if [ "${AUTOPKGTEST_TMP}" = "" ] ; then + AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) + trap "rm -rf ${AUTOPKGTEST_TMP}" 0 INT QUIT ABRT PIPE TERM +fi + +cp /usr/share/doc/${pkg}/examples/* -a "${AUTOPKGTEST_TMP}" + +cd "${AUTOPKGTEST_TMP}" +gunzip -r * + +echo 'Test 1' +freecontact --mincontsep 2 --parprof evfold --pep -f demo_1000.aln +echo 'PASS' +echo + +echo 'Test 2' +/usr/share/freecontact/a2m2aln --query '^RASH_HUMAN/(\d+)' < PF00071_v25_999.fa | freecontact --rho 0.5 -p 2 +echo 'PASS' +echo ===================================== debian/watch ===================================== @@ -1,4 +1,4 @@ version=3 opts=passive \ -ftp://rostlab.org/free/freecontact-([0-9.]+)\.tar\..z debian uupdate +ftp://rostlab.org/free/freecontact-([0-9.]+)\.tar\..z debian View it on GitLab: https://salsa.debian.org/med-team/freecontact/-/compare/9aa5a41d7f1c5e0aa6a621ab66ab3f3b37cf323d...46d2dad0094e90bf1d725f62499be2083a716efa -- View it on GitLab: https://salsa.debian.org/med-team/freecontact/-/compare/9aa5a41d7f1c5e0aa6a621ab66ab3f3b37cf323d...46d2dad0094e90bf1d725f62499be2083a716efa You're receiving this email because of your account on salsa.debian.org.
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