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The "DebianMed/SoftwareLiberation" page has been changed by AndreasTille: https://wiki.debian.org/DebianMed/SoftwareLiberation?action=diff&rev1=59&rev2=60 Comment: fasta3 and r-cran-locfit are free now ||[[https://genome.sph.umich.edu/wiki/EMMAX|emmax]] ||[[https://lists.debian.org/debian-med/2018/02/msg00023.html|Debian Med list]] ||MIT||2019-03|| ||[[https://github.com/genometools/vstree|Vmatch]] ||Personal communication ||Previously closed-source code released on GitHub (ISC)||2019-02-11|| ||[[https://github.com/genometools/genomethreader|GenomeThreader]] ||Personal communication ||Previously closed-source code released on GitHub (ISC)||2019-02-11|| + ||[[http://faculty.virginia.edu/wrpearson/fasta/CURRENT/|fasta3]] ||[[https://lists.debian.org/debian-med/2018/04/msg00075.html|Debian Med list]] ||Used freely license of libssw||2020-01-11|| + ||[[https://cran.r-project.org/package=locfit|r-cran-locfit]] ||[[https://lists.debian.org/debian-med/2012/02/msg00213.html|Debian Med list]] ||License clarified||2029-03-27|| + == Discussion in progress == ||'''Software''' ||'''Debian Med contact''' ||'''Status upstream''' || '''Date''' || @@ -36, +39 @@ ||[[http://cmpg.unibe.ch/software/fastsimcoal2/|fastsimcoal2]] ||[[https://groups.google.com/forum/#!topic/fastsimcoal/2MrVmpkhuPw|User forum]]||Laurent Excoffier: "No source code" without arguments||2016-06-23|| ||[[http://tandem.bu.edu/trf/trf.html|trf]] ||[[https://lists.debian.org/debian-med/2016/04/msg00084.html|Debian Med list]] ||[[https://lists.debian.org/debian-med/2017/10/msg00044.html|Yozen Hernandez]] confirmed long term goal to use a free license || 2017-10-12 || ||[[http://prodata.swmed.edu/pcma/pcma.php|pcma]] ||[[https://lists.debian.org/debian-med/2017/01/msg00006.html|Debian Med list]] ||No answer yet||2017-01-04|| - ||[[https://cran.r-project.org/package=locfit|r-cran-locfit]] ||[[https://lists.debian.org/debian-med/2012/02/msg00213.html|Debian Med list]][[https://bugs.debian.org/731599|ITP #731599]] ||Author vanished||2012-02-21|| ||[[http://www.cbs.dtu.dk/services/SignalP/|SignalP]] ||[[https://lists.debian.org/debian-med/2017/04/msg00039.html|Debian Med list]] ||No answer yet||2017-04-25|| ||[[http://exon.gatech.edu/GeneMark/|GeneMark]] ||[[https://lists.debian.org/debian-med/2017/04/msg00041.html|Debian Med list]] ||No answer yet||2017-04-25|| ||[[https://card.mcmaster.ca/|CARD RGI]] ||[[https://lists.debian.org/debian-med/2017/05/msg00031.html|Debian Med list]] ||No answer yet||2017-05-12|| ||[[http://research-pub.gene.com/gmap/|GMAP]] ||[[https://lists.debian.org/debian-med/2017/09/msg00013.html|Debian Med list]] ||[[https://lists.debian.org/debian-med/2017/09/msg00020.html|Discussion]]||2017-09-04|| ||[[https://github.com/chairmank/locfit|locfit]] ||[[https://github.com/chairmank/locfit/issues/1|Issue on Github]] ||No answer yet||2017-09-06|| ||[[https://github.com/rambaut/Seq-Gen|seq-gen]] ||[[https://github.com/rambaut/Seq-Gen/issues/10|Issue on Github]] ||No answer yet||2017-09-06|| - ||[[http://faculty.virginia.edu/wrpearson/fasta/CURRENT/|fasta3]] ||[[https://lists.debian.org/debian-med/2018/04/msg00075.html|Debian Med list]] ||No answer yet||2018-04-19|| ||[[https://github.com/aparapi/aparapi/|aparapi]] ||[[https://github.com/aparapi/aparapi/issues/50|Github issue]] ||No answer yet||2018-05-18|| ||[[http://lowelab.ucsc.edu/tRNAscan-SE|trnascan-se]] ||[[https://lists.debian.org/debian-med/2018/08/msg00013.html|Debian Med list]] ||No answer yet||2018-08-05|| ||[[http://www.arb-home.de/|libarb]] ||[[https://lists.debian.org/debian-med/2019/04/msg00041.html|Debian Med list]] ||No answer yet||2019-04-24|| _______________________________________________ debian-med-commit mailing list debian-med-com...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-commit
