Étienne Mollier pushed to branch master at Debian Med / salmon
Commits: 471a464d by Étienne Mollier at 2022-10-28T18:25:51+02:00 New upstream version 1.9.0+ds1 - - - - - aa16855f by Étienne Mollier at 2022-10-28T18:25:51+02:00 routine-update: New upstream version - - - - - 218ecbc5 by Étienne Mollier at 2022-10-28T18:25:55+02:00 Update upstream source from tag 'upstream/1.9.0+ds1' Update to upstream version '1.9.0+ds1' with Debian dir 82da8a3b43661d5db9dea02400bc3950fda8aa57 - - - - - b3c1fa69 by Étienne Mollier at 2022-10-28T18:25:55+02:00 routine-update: Standards-Version: 4.6.1 - - - - - 94015975 by Étienne Mollier at 2022-10-28T18:26:38+02:00 spelling patch: refresh. - - - - - 4768eb61 by Étienne Mollier at 2022-10-28T18:30:25+02:00 use_debian_packaged_libs.patch: refresh. - - - - - 38aa0447 by Étienne Mollier at 2022-10-28T18:30:47+02:00 disable-version-check.patch: refresh. - - - - - 53b6a1a1 by Étienne Mollier at 2022-10-31T22:17:10+01:00 use_debian_packaged_libs.patch: don't scan for plain tbb. The oneapi tbb will be used instead. - - - - - 8a731d83 by Étienne Mollier at 2022-10-31T22:18:29+01:00 d/external/: bump pufferfish version to support onetbb. - - - - - dc17dc6f by Étienne Mollier at 2022-10-31T22:30:43+01:00 d/external/: update twopaco to fix ftbfs with onetbb. - - - - - e6a9e4a0 by Étienne Mollier at 2022-11-01T14:41:16+01:00 d/external/: update to reflect changes in embedded pufferfish. - - - - - bc37f508 by Étienne Mollier at 2022-11-01T14:41:47+01:00 use_debian_packaged_libs.patch: adjust to missing external assets. - - - - - 7df0dd8c by Étienne Mollier at 2022-11-01T14:58:24+01:00 update changelog. - - - - - 74739a44 by Étienne Mollier at 2022-11-01T15:04:56+01:00 leave fixme item. - - - - - 03656e49 by Étienne Mollier at 2022-11-04T00:10:39+01:00 d/e/p/e/twopaco: upgrade vendored version for onetbb support. - - - - - 7c5fedb0 by Étienne Mollier at 2022-11-04T00:11:26+01:00 d/e/pufferfish: upgrade vendored version for onetbb support. - - - - - fdb2f485 by Étienne Mollier at 2022-11-04T00:12:09+01:00 d/e/i/i/pufferfish: upgrade files. - - - - - 4267cd8e by Étienne Mollier at 2022-11-04T00:12:51+01:00 use_debian_packaged_libs.patch: adjust to build through. - - - - - 19ecb3f0 by Étienne Mollier at 2022-11-04T00:15:33+01:00 update FIXME in changelog. - - - - - 26 changed files: - .drone.yml - .drone/build.sh - .drone/test_quant.sh - CMakeLists.txt - + CONTRIBUTING.md - README.md - current_version.txt - debian/changelog - debian/control - debian/external/install/include/pufferfish/CommonTypes.hpp - debian/external/install/include/pufferfish/MemChainer.hpp - debian/external/install/include/pufferfish/MemCollector.hpp - debian/external/install/include/pufferfish/PairedAlignmentFormatter.hpp - debian/external/install/include/pufferfish/ProgOpts.hpp - debian/external/install/include/pufferfish/SAMWriter.hpp - debian/external/install/include/pufferfish/Util.hpp - debian/external/install/include/pufferfish/compact_vector/compact_iterator.hpp - debian/external/install/include/pufferfish/compact_vector/compact_vector.hpp - + debian/external/install/include/pufferfish/itlib/dynamic_bitset.hpp - + debian/external/install/include/pufferfish/itlib/expected.hpp - + debian/external/install/include/pufferfish/itlib/flat_map.hpp - + debian/external/install/include/pufferfish/itlib/flat_set.hpp - + debian/external/install/include/pufferfish/itlib/make_ptr.hpp - + debian/external/install/include/pufferfish/itlib/mem_streambuf.hpp - + debian/external/install/include/pufferfish/itlib/memory_view.hpp - + debian/external/install/include/pufferfish/itlib/mutex.hpp The diff was not included because it is too large. View it on GitLab: https://salsa.debian.org/med-team/salmon/-/compare/5a4686dd4a317d7eca724727b1a34e2577bc5904...19ecb3f06d818b14fbda2d0e6e36a3a2b98c4af6 -- View it on GitLab: https://salsa.debian.org/med-team/salmon/-/compare/5a4686dd4a317d7eca724727b1a34e2577bc5904...19ecb3f06d818b14fbda2d0e6e36a3a2b98c4af6 You're receiving this email because of your account on salsa.debian.org.
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