The following commit has been merged in the master branch:
commit db8d6100b5480c7641d48e1a6990759fcb2be876
Author: Andreas Tille <[email protected]>
Date: Sat Mar 31 08:30:31 2012 +0200
Due to the use of hardening flags warnings about unused-but-set-variable
becomes an error - start working on a patch
diff --git a/debian/changelog b/debian/changelog
index ea2bd1e..30b4afd 100644
--- a/debian/changelog
+++ b/debian/changelog
@@ -4,8 +4,11 @@ jellyfish (1.1.4-1) UNRELEASED; urgency=low
* debian/patches/ptrdiff_t: Removed because applied upstream
* debian/patches/cmdline: Removed because upstream code was changed
in a way that it becomes superflous
+ * debian/patches/fix-unused-but-set-variable.patch: Due to the use
+ of hardening flags warnings about unused-but-set-variable becomes
+ an error - start working on a patch
- -- Andreas Tille <[email protected]> Sat, 31 Mar 2012 00:25:12 +0200
+ -- Andreas Tille <[email protected]> Sat, 31 Mar 2012 08:28:08 +0200
jellyfish (1.1.2-1) unstable; urgency=low
diff --git a/debian/patches/fix-unused-but-set-variable.patch
b/debian/patches/fix-unused-but-set-variable.patch
new file mode 100644
index 0000000..7786428
--- /dev/null
+++ b/debian/patches/fix-unused-but-set-variable.patch
@@ -0,0 +1,23 @@
+--- jellyfish.orig/unit_tests/test_offsets_key_value.cc
++++ jellyfish/unit_tests/test_offsets_key_value.cc
+@@ -38,7 +38,7 @@
+ uint_t lk_len = 4;
+ uint_t lv_len = kv_len - lk_len;
+ uint_t i = 0;
+- uint64_t *w, *pw;
++ // uint64_t *w, *pw;
+
+ // /* Still missing:
+ // * - testing of value masks
+@@ -47,9 +47,9 @@
+ EXPECT_EQ(lv_len, this->offsets.get_lval_len());
+
+ for(i = 0; true; i++) {
+- w = this->offsets.get_word_offset(i, &it, &lit, NULL);
++ /* w = */ this->offsets.get_word_offset(i, &it, &lit, NULL);
+ if(i > 0) {
+- pw = this->offsets.get_word_offset(i-1, &pit, &lpit, NULL);
++ /* pw = */ this->offsets.get_word_offset(i-1, &pit, &lpit, NULL);
+
+ uint_t noff = pit->key.boff + kv_len;
+ if(noff > 64) {
diff --git a/debian/patches/series b/debian/patches/series
index 2a3700c..2ed35fb 100644
--- a/debian/patches/series
+++ b/debian/patches/series
@@ -1 +1,2 @@
man
+fix-unused-but-set-variable.patch
--
count k-mers of DNA
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