Le Mon, Aug 18, 2014 at 08:53:12AM +0200, Olivier Sallou a écrit : > > do you know, by chance, what is the difference between samtools and the > net.sf.samtools Java lib of picard-tools ? They look quite the same. > > The HTSlib fix an issue forigv (on SAMFileWriterFactory), but > SAMFileWriterFactory class in picard-tools is not the same than the one in > HTSlib.
Hi Olivier, the home page of Picard (<http://picard.sourceforge.net/index.shtml>) has been recently updated to mention both https://github.com/broadinstitute/picard and https://github.com/samtools/htsjdk, so I guess that they work together and that the fix in HTSJDK will eventually propagate to Picard ? Have a nice day, -- Charles Plessy Debian Med packaging team, http://www.debian.org/devel/debian-med Tsurumi, Kanagawa, Japan -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: https://lists.debian.org/20140818072029.gb25...@falafel.plessy.net
