Package: wnpp Severity: wishlist Owner: Charles Plessy <[EMAIL PROTECTED]>
Package name : probcons Version : 1.10 Upstream Author : Chuong B. Do <[EMAIL PROTECTED]> URL : http://probcons.stanford.edu/download.html License : Public Domain Description : PROBabilistic CONSistency-based multiple sequence alignment PROBCONS is a tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN. Probcons is published in Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. Genome Research 15: 330-340. . Homepage: http://probcons.stanford.edu/ -- System Information: Debian Release: testing/unstable APT prefers testing APT policy: (500, 'testing') Architecture: powerpc (ppc64) Shell: /bin/sh linked to /bin/bash Kernel: Linux 2.6.16farm Locale: LANG=fr_FR.UTF-8, LC_CTYPE=fr_FR.UTF-8 (charmap=UTF-8) -- To UNSUBSCRIBE, email to [EMAIL PROTECTED] with a subject of "unsubscribe". Trouble? Contact [EMAIL PROTECTED]
