Bug#1095359: marked as done (napari: FTBFS: E ImportError: numpy.core.multiarray failed to import)

[Debian Bug Tracking System]

Your message dated Fri, 14 Mar 2025 17:57:50 +0000
with message-id <e1tt9i6-002oug...@fasolo.debian.org>
and subject line Bug#1095359: fixed in napari 0.5.6-1
has caused the Debian Bug report #1095359,
regarding napari: FTBFS: E   ImportError: numpy.core.multiarray failed to import
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1095359: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1095359
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems

--- Begin Message ---

Package: src:napari
Version: 0.5.5-1
Severity: serious
Tags: ftbfs trixie sid

Dear maintainer:

During a rebuild of all packages in unstable, your package failed to build:

--------------------------------------------------------------------------------
[...]
 debian/rules clean
dh clean --buildsystem=pybuild
   dh_auto_clean -O--buildsystem=pybuild
   dh_autoreconf_clean -O--buildsystem=pybuild
   dh_clean -O--buildsystem=pybuild
 debian/rules binary
dh binary --buildsystem=pybuild
   dh_update_autotools_config -O--buildsystem=pybuild
   dh_autoreconf -O--buildsystem=pybuild
   dh_auto_configure -O--buildsystem=pybuild
   dh_auto_build -O--buildsystem=pybuild
I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" 
module
I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation 
--wheel --outdir /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari  
* Building wheel...

[... snipped ...]

adding 'napari/resources/icons/new_tracks.svg'
adding 'napari/resources/icons/new_vectors.svg'
adding 'napari/resources/icons/none.svg'
adding 'napari/resources/icons/paint.svg'
adding 'napari/resources/icons/pan_arrows.svg'
adding 'napari/resources/icons/path.svg'
adding 'napari/resources/icons/picker.svg'
adding 'napari/resources/icons/plus.svg'
adding 'napari/resources/icons/polygon.svg'
adding 'napari/resources/icons/polygon_lasso.svg'
adding 'napari/resources/icons/pop_out.svg'
adding 'napari/resources/icons/rectangle.svg'
adding 'napari/resources/icons/right_arrow.svg'
adding 'napari/resources/icons/roll.svg'
adding 'napari/resources/icons/select.svg'
adding 'napari/resources/icons/shuffle.svg'
adding 'napari/resources/icons/square.svg'
adding 'napari/resources/icons/step_left.svg'
adding 'napari/resources/icons/step_right.svg'
adding 'napari/resources/icons/transform.svg'
adding 'napari/resources/icons/transpose.svg'
adding 'napari/resources/icons/up_arrow.svg'
adding 'napari/resources/icons/vertex_insert.svg'
adding 'napari/resources/icons/vertex_remove.svg'
adding 'napari/resources/icons/vertical_separator.svg'
adding 'napari/resources/icons/visibility.svg'
adding 'napari/resources/icons/visibility_off.svg'
adding 'napari/resources/icons/warning.svg'
adding 'napari/resources/icons/zoom.svg'
adding 'napari/settings/__init__.py'
adding 'napari/settings/_appearance.py'
adding 'napari/settings/_application.py'
adding 'napari/settings/_base.py'
adding 'napari/settings/_constants.py'
adding 'napari/settings/_experimental.py'
adding 'napari/settings/_fields.py'
adding 'napari/settings/_migrations.py'
adding 'napari/settings/_napari_settings.py'
adding 'napari/settings/_plugins.py'
adding 'napari/settings/_shortcuts.py'
adding 'napari/settings/_utils.py'
adding 'napari/settings/_yaml.py'
adding 'napari/settings/_tests/__init__.py'
adding 'napari/settings/_tests/test_migrations.py'
adding 'napari/settings/_tests/test_settings.py'
adding 'napari/settings/_tests/test_utils.py'
adding 'napari/utils/__init__.py'
adding 'napari/utils/_appdirs.py'
adding 'napari/utils/_base.py'
adding 'napari/utils/_dask_utils.py'
adding 'napari/utils/_dtype.py'
adding 'napari/utils/_indexing.py'
adding 'napari/utils/_magicgui.py'
adding 'napari/utils/_proxies.py'
adding 'napari/utils/_register.py'
adding 'napari/utils/_test_utils.py'
adding 'napari/utils/_testsupport.py'
adding 'napari/utils/_tracebacks.py'
adding 'napari/utils/_units.py'
adding 'napari/utils/action_manager.py'
adding 'napari/utils/add_layer.py_tmpl'
adding 'napari/utils/color.py'
adding 'napari/utils/compat.py'
adding 'napari/utils/config.py'
adding 'napari/utils/geometry.py'
adding 'napari/utils/history.py'
adding 'napari/utils/indexing.py'
adding 'napari/utils/info.py'
adding 'napari/utils/interactions.py'
adding 'napari/utils/io.py'
adding 'napari/utils/key_bindings.py'
adding 'napari/utils/migrations.py'
adding 'napari/utils/misc.py'
adding 'napari/utils/mouse_bindings.py'
adding 'napari/utils/naming.py'
adding 'napari/utils/notebook_display.py'
adding 'napari/utils/notifications.py'
adding 'napari/utils/progress.py'
adding 'napari/utils/shortcuts.py'
adding 'napari/utils/status_messages.py'
adding 'napari/utils/stubgen.py'
adding 'napari/utils/theme.py'
adding 'napari/utils/translations.py'
adding 'napari/utils/validators.py'
adding 'napari/utils/_tests/__init__.py'
adding 'napari/utils/_tests/test_action_manager.py'
adding 'napari/utils/_tests/test_compat.py'
adding 'napari/utils/_tests/test_dtype.py'
adding 'napari/utils/_tests/test_geometry.py'
adding 'napari/utils/_tests/test_history.py'
adding 'napari/utils/_tests/test_info.py'
adding 'napari/utils/_tests/test_interactions.py'
adding 'napari/utils/_tests/test_io.py'
adding 'napari/utils/_tests/test_key_bindings.py'
adding 'napari/utils/_tests/test_migrations.py'
adding 'napari/utils/_tests/test_misc.py'
adding 'napari/utils/_tests/test_naming.py'
adding 'napari/utils/_tests/test_notification_manager.py'
adding 'napari/utils/_tests/test_progress.py'
adding 'napari/utils/_tests/test_proxies.py'
adding 'napari/utils/_tests/test_register.py'
adding 'napari/utils/_tests/test_status.py'
adding 'napari/utils/_tests/test_theme.py'
adding 'napari/utils/_tests/test_translations.py'
adding 'napari/utils/_tests/test_validators.py'
adding 'napari/utils/colormaps/__init__.py'
adding 'napari/utils/colormaps/_accelerated_cmap.py'
adding 'napari/utils/colormaps/bop_colors.py'
adding 'napari/utils/colormaps/categorical_colormap.py'
adding 'napari/utils/colormaps/categorical_colormap_utils.py'
adding 'napari/utils/colormaps/colorbars.py'
adding 'napari/utils/colormaps/colormap.py'
adding 'napari/utils/colormaps/colormap_utils.py'
adding 'napari/utils/colormaps/inverse_colormaps.py'
adding 'napari/utils/colormaps/standardize_color.py'
adding 'napari/utils/colormaps/_tests/__init__.py'
adding 'napari/utils/colormaps/_tests/colors_data.py'
adding 'napari/utils/colormaps/_tests/test_categorical_colormap.py'
adding 'napari/utils/colormaps/_tests/test_categorical_colormap_utils.py'
adding 'napari/utils/colormaps/_tests/test_color_to_array.py'
adding 'napari/utils/colormaps/_tests/test_colormap.py'
adding 'napari/utils/colormaps/_tests/test_colormap_utils.py'
adding 'napari/utils/colormaps/_tests/test_colormaps.py'
adding 'napari/utils/colormaps/vendored/__init__.py'
adding 'napari/utils/colormaps/vendored/_cm.py'
adding 'napari/utils/colormaps/vendored/_cm_listed.py'
adding 'napari/utils/colormaps/vendored/_color_data.py'
adding 'napari/utils/colormaps/vendored/cm.py'
adding 'napari/utils/colormaps/vendored/colors.py'
adding 'napari/utils/events/__init__.py'
adding 'napari/utils/events/custom_types.py'
adding 'napari/utils/events/debugging.py'
adding 'napari/utils/events/event.py'
adding 'napari/utils/events/event_utils.py'
adding 'napari/utils/events/evented_model.py'
adding 'napari/utils/events/migrations.py'
adding 'napari/utils/events/types.py'
adding 'napari/utils/events/_tests/test_event_emitter.py'
adding 'napari/utils/events/_tests/test_event_migrations.py'
adding 'napari/utils/events/_tests/test_event_utils.py'
adding 'napari/utils/events/_tests/test_evented_dict.py'
adding 'napari/utils/events/_tests/test_evented_list.py'
adding 'napari/utils/events/_tests/test_evented_model.py'
adding 'napari/utils/events/_tests/test_evented_set.py'
adding 'napari/utils/events/_tests/test_selectable_list.py'
adding 'napari/utils/events/_tests/test_selection.py'
adding 'napari/utils/events/_tests/test_typed_dict.py'
adding 'napari/utils/events/_tests/test_typed_list.py'
adding 'napari/utils/events/containers/__init__.py'
adding 'napari/utils/events/containers/_dict.py'
adding 'napari/utils/events/containers/_evented_dict.py'
adding 'napari/utils/events/containers/_evented_list.py'
adding 'napari/utils/events/containers/_nested_list.py'
adding 'napari/utils/events/containers/_selectable_list.py'
adding 'napari/utils/events/containers/_selection.py'
adding 'napari/utils/events/containers/_set.py'
adding 'napari/utils/events/containers/_typed.py'
adding 'napari/utils/perf/__init__.py'
adding 'napari/utils/perf/_config.py'
adding 'napari/utils/perf/_event.py'
adding 'napari/utils/perf/_patcher.py'
adding 'napari/utils/perf/_stat.py'
adding 'napari/utils/perf/_timers.py'
adding 'napari/utils/perf/_trace_file.py'
adding 'napari/utils/settings/__init__.py'
adding 'napari/utils/transforms/__init__.py'
adding 'napari/utils/transforms/_units.py'
adding 'napari/utils/transforms/transform_utils.py'
adding 'napari/utils/transforms/transforms.py'
adding 'napari/utils/transforms/_tests/test_transform_chain.py'
adding 'napari/utils/transforms/_tests/test_transform_utils.py'
adding 'napari/utils/transforms/_tests/test_transforms.py'
adding 'napari/utils/tree/__init__.py'
adding 'napari/utils/tree/group.py'
adding 'napari/utils/tree/node.py'
adding 'napari/utils/tree/_tests/test_tree_model.py'
adding 'napari_builtins/__init__.py'
adding 'napari_builtins/_ndims_balls.py'
adding 'napari_builtins/_skimage_data.py'
adding 'napari_builtins/builtins.yaml'
adding 'napari_builtins/_tests/conftest.py'
adding 'napari_builtins/_tests/test_io.py'
adding 'napari_builtins/_tests/test_ndims_balls.py'
adding 'napari_builtins/_tests/test_reader.py'
adding 'napari_builtins/_tests/test_writer.py'
adding 'napari_builtins/io/__init__.py'
adding 'napari_builtins/io/_read.py'
adding 'napari_builtins/io/_write.py'
adding 'napari-0.5.5.dist-info/LICENSE'
adding 'napari-0.5.5.dist-info/METADATA'
adding 'napari-0.5.5.dist-info/WHEEL'
adding 'napari-0.5.5.dist-info/entry_points.txt'
adding 'napari-0.5.5.dist-info/top_level.txt'
adding 'napari-0.5.5.dist-info/RECORD'
removing build/bdist.linux-x86_64/wheel
Successfully built napari-0.5.5-py3-none-any.whl
I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.13 with 
"installer" module
   dh_auto_test -O--buildsystem=pybuild
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build; 
python3.12 -m pytest -m 'not needs_network'

A module that was compiled using NumPy 1.x cannot be run in
NumPy 2.2.2 as it may crash. To support both 1.x and 2.x
versions of NumPy, modules must be compiled with NumPy 2.0.
Some module may need to rebuild instead e.g. with 'pybind11>=2.12'.

If you are a user of the module, the easiest solution will be to
downgrade to 'numpy<2' or try to upgrade the affected module.
We expect that some modules will need time to support NumPy 2.

Traceback (most recent call last):  File "<frozen runpy>", line 198, in 
_run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "/usr/lib/python3/dist-packages/pytest/__main__.py", line 9, in <module>
    raise SystemExit(pytest.console_main())
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 201, 
in console_main
    code = main()
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 156, 
in main
    config = _prepareconfig(args, plugins)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 341, 
in _prepareconfig
    config = pluginmanager.hook.pytest_cmdline_parse(
  File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513, in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, 
firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120, in 
_hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103, in 
_multicall
    res = hook_impl.function(*args)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1140, 
in pytest_cmdline_parse
    self.parse(args)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1494, 
in parse
    self._preparse(args, addopts=addopts)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1398, 
in _preparse
    self.hook.pytest_load_initial_conftests(
  File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513, in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, 
firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120, in 
_hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103, in 
_multicall
    res = hook_impl.function(*args)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1222, 
in pytest_load_initial_conftests
    self.pluginmanager._set_initial_conftests(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 581, 
in _set_initial_conftests
    self._try_load_conftest(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 619, 
in _try_load_conftest
    self._loadconftestmodules(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 659, 
in _loadconftestmodules
    mod = self._importconftest(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 710, 
in _importconftest
    mod = import_path(
  File "/usr/lib/python3/dist-packages/_pytest/pathlib.py", line 587, in 
import_path
    importlib.import_module(module_name)
  File "/usr/lib/python3.12/importlib/__init__.py", line 90, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/conftest.py", line 
63, in <module>
    from napari.components import LayerList
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/components/__init__.py",
 line 19, in <module>
    from napari.components.layerlist import LayerList
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/components/layerlist.py",
 line 13, in <module>
    from napari.layers import Layer
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/__init__.py",
 line 14, in <module>
    from napari.layers.shapes import Shapes
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/shapes/__init__.py",
 line 1, in <module>
    from napari.layers.shapes import _shapes_key_bindings
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/shapes/_shapes_key_bindings.py",
 line 7, in <module>
    from napari.layers.shapes._shapes_constants import Box, Mode
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/shapes/_shapes_constants.py",
 line 5, in <module>
    from napari.layers.shapes._shapes_models import (
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/shapes/_shapes_models/__init__.py",
 line 1, in <module>
    from napari.layers.shapes._shapes_models.ellipse import Ellipse
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/shapes/_shapes_models/ellipse.py",
 line 3, in <module>
    from napari.layers.shapes._shapes_models.shape import Shape
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/shapes/_shapes_models/shape.py",
 line 9, in <module>
    from napari.layers.shapes._shapes_utils import (
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/layers/shapes/_shapes_utils.py",
 line 8, in <module>
    from vispy.visuals.tube import _frenet_frames
  File "/usr/lib/python3/dist-packages/vispy/visuals/__init__.py", line 14, in 
<module>
    from .axis import AxisVisual  # noqa
  File "/usr/lib/python3/dist-packages/vispy/visuals/axis.py", line 13, in 
<module>
    from .text import TextVisual
  File "/usr/lib/python3/dist-packages/vispy/visuals/text/__init__.py", line 7, 
in <module>
    from .text import TextVisual  # noqa
  File "/usr/lib/python3/dist-packages/vispy/visuals/text/text.py", line 18, in 
<module>
    from ._sdf_cpu import _calc_distance_field
ImportError while loading conftest 
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build/napari/conftest.py'.
napari/conftest.py:63: in <module>
    from napari.components import LayerList
napari/components/__init__.py:19: in <module>
    from napari.components.layerlist import LayerList
napari/components/layerlist.py:13: in <module>
    from napari.layers import Layer
napari/layers/__init__.py:14: in <module>
    from napari.layers.shapes import Shapes
napari/layers/shapes/__init__.py:1: in <module>
    from napari.layers.shapes import _shapes_key_bindings
napari/layers/shapes/_shapes_key_bindings.py:7: in <module>
    from napari.layers.shapes._shapes_constants import Box, Mode
napari/layers/shapes/_shapes_constants.py:5: in <module>
    from napari.layers.shapes._shapes_models import (
napari/layers/shapes/_shapes_models/__init__.py:1: in <module>
    from napari.layers.shapes._shapes_models.ellipse import Ellipse
napari/layers/shapes/_shapes_models/ellipse.py:3: in <module>
    from napari.layers.shapes._shapes_models.shape import Shape
napari/layers/shapes/_shapes_models/shape.py:9: in <module>
    from napari.layers.shapes._shapes_utils import (
napari/layers/shapes/_shapes_utils.py:8: in <module>
    from vispy.visuals.tube import _frenet_frames
/usr/lib/python3/dist-packages/vispy/visuals/__init__.py:14: in <module>
    from .axis import AxisVisual  # noqa
/usr/lib/python3/dist-packages/vispy/visuals/axis.py:13: in <module>
    from .text import TextVisual
/usr/lib/python3/dist-packages/vispy/visuals/text/__init__.py:7: in <module>
    from .text import TextVisual  # noqa
/usr/lib/python3/dist-packages/vispy/visuals/text/text.py:18: in <module>
    from ._sdf_cpu import _calc_distance_field
vispy/visuals/text/_sdf_cpu.pyx:1: in init vispy.visuals.text._sdf_cpu
    ???
E   ImportError: numpy.core.multiarray failed to import (auto-generated because 
you didn't call 'numpy.import_array()' after cimporting numpy; use 
'<void>numpy._import_array' to disable if you are certain you don't need it).
E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=4: cd 
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.12_napari/build; python3.12 -m pytest -m 
'not needs_network'
I: pybuild base:311: cd /<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build; 
python3.13 -m pytest -m 'not needs_network'

A module that was compiled using NumPy 1.x cannot be run in
NumPy 2.2.2 as it may crash. To support both 1.x and 2.x
versions of NumPy, modules must be compiled with NumPy 2.0.
Some module may need to rebuild instead e.g. with 'pybind11>=2.12'.

If you are a user of the module, the easiest solution will be to
downgrade to 'numpy<2' or try to upgrade the affected module.
We expect that some modules will need time to support NumPy 2.

Traceback (most recent call last):  File "<frozen runpy>", line 198, in 
_run_module_as_main
  File "<frozen runpy>", line 88, in _run_code
  File "/usr/lib/python3/dist-packages/pytest/__main__.py", line 9, in <module>
    raise SystemExit(pytest.console_main())
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 201, 
in console_main
    code = main()
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 156, 
in main
    config = _prepareconfig(args, plugins)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 341, 
in _prepareconfig
    config = pluginmanager.hook.pytest_cmdline_parse(
  File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513, in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, 
firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120, in 
_hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103, in 
_multicall
    res = hook_impl.function(*args)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1140, 
in pytest_cmdline_parse
    self.parse(args)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1494, 
in parse
    self._preparse(args, addopts=addopts)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1398, 
in _preparse
    self.hook.pytest_load_initial_conftests(
  File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513, in __call__
    return self._hookexec(self.name, self._hookimpls.copy(), kwargs, 
firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120, in 
_hookexec
    return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
  File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103, in 
_multicall
    res = hook_impl.function(*args)
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 1222, 
in pytest_load_initial_conftests
    self.pluginmanager._set_initial_conftests(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 581, 
in _set_initial_conftests
    self._try_load_conftest(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 619, 
in _try_load_conftest
    self._loadconftestmodules(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 659, 
in _loadconftestmodules
    mod = self._importconftest(
  File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 710, 
in _importconftest
    mod = import_path(
  File "/usr/lib/python3/dist-packages/_pytest/pathlib.py", line 587, in 
import_path
    importlib.import_module(module_name)
  File "/usr/lib/python3.13/importlib/__init__.py", line 88, in import_module
    return _bootstrap._gcd_import(name[level:], package, level)
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/conftest.py", line 
63, in <module>
    from napari.components import LayerList
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/components/__init__.py",
 line 19, in <module>
    from napari.components.layerlist import LayerList
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/components/layerlist.py",
 line 13, in <module>
    from napari.layers import Layer
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/__init__.py",
 line 14, in <module>
    from napari.layers.shapes import Shapes
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/shapes/__init__.py",
 line 1, in <module>
    from napari.layers.shapes import _shapes_key_bindings
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/shapes/_shapes_key_bindings.py",
 line 7, in <module>
    from napari.layers.shapes._shapes_constants import Box, Mode
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/shapes/_shapes_constants.py",
 line 5, in <module>
    from napari.layers.shapes._shapes_models import (
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/shapes/_shapes_models/__init__.py",
 line 1, in <module>
    from napari.layers.shapes._shapes_models.ellipse import Ellipse
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/shapes/_shapes_models/ellipse.py",
 line 3, in <module>
    from napari.layers.shapes._shapes_models.shape import Shape
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/shapes/_shapes_models/shape.py",
 line 9, in <module>
    from napari.layers.shapes._shapes_utils import (
  File "/usr/lib/python3/dist-packages/_pytest/assertion/rewrite.py", line 184, 
in exec_module
    exec(co, module.__dict__)
  File 
"/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/layers/shapes/_shapes_utils.py",
 line 8, in <module>
    from vispy.visuals.tube import _frenet_frames
  File "/usr/lib/python3/dist-packages/vispy/visuals/__init__.py", line 14, in 
<module>
    from .axis import AxisVisual  # noqa
  File "/usr/lib/python3/dist-packages/vispy/visuals/axis.py", line 13, in 
<module>
    from .text import TextVisual
  File "/usr/lib/python3/dist-packages/vispy/visuals/text/__init__.py", line 7, 
in <module>
    from .text import TextVisual  # noqa
  File "/usr/lib/python3/dist-packages/vispy/visuals/text/text.py", line 18, in 
<module>
    from ._sdf_cpu import _calc_distance_field
ImportError while loading conftest 
'/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build/napari/conftest.py'.
napari/conftest.py:63: in <module>
    from napari.components import LayerList
napari/components/__init__.py:19: in <module>
    from napari.components.layerlist import LayerList
napari/components/layerlist.py:13: in <module>
    from napari.layers import Layer
napari/layers/__init__.py:14: in <module>
    from napari.layers.shapes import Shapes
napari/layers/shapes/__init__.py:1: in <module>
    from napari.layers.shapes import _shapes_key_bindings
napari/layers/shapes/_shapes_key_bindings.py:7: in <module>
    from napari.layers.shapes._shapes_constants import Box, Mode
napari/layers/shapes/_shapes_constants.py:5: in <module>
    from napari.layers.shapes._shapes_models import (
napari/layers/shapes/_shapes_models/__init__.py:1: in <module>
    from napari.layers.shapes._shapes_models.ellipse import Ellipse
napari/layers/shapes/_shapes_models/ellipse.py:3: in <module>
    from napari.layers.shapes._shapes_models.shape import Shape
napari/layers/shapes/_shapes_models/shape.py:9: in <module>
    from napari.layers.shapes._shapes_utils import (
napari/layers/shapes/_shapes_utils.py:8: in <module>
    from vispy.visuals.tube import _frenet_frames
/usr/lib/python3/dist-packages/vispy/visuals/__init__.py:14: in <module>
    from .axis import AxisVisual  # noqa
/usr/lib/python3/dist-packages/vispy/visuals/axis.py:13: in <module>
    from .text import TextVisual
/usr/lib/python3/dist-packages/vispy/visuals/text/__init__.py:7: in <module>
    from .text import TextVisual  # noqa
/usr/lib/python3/dist-packages/vispy/visuals/text/text.py:18: in <module>
    from ._sdf_cpu import _calc_distance_field
vispy/visuals/text/_sdf_cpu.pyx:1: in init vispy.visuals.text._sdf_cpu
    ???
E   ImportError: numpy.core.multiarray failed to import (auto-generated because 
you didn't call 'numpy.import_array()' after cimporting numpy; use 
'<void>numpy._import_array' to disable if you are certain you don't need it).
E: pybuild pybuild:389: test: plugin pyproject failed with: exit code=4: cd 
/<<PKGBUILDDIR>>/.pybuild/cpython3_3.13_napari/build; python3.13 -m pytest -m 
'not needs_network'
dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 
3.13" returned exit code 13
make: *** [debian/rules:7: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------

The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:

https://people.debian.org/~sanvila/build-logs/202502/

About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.

If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.

If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:napari, so that this is still
visible in the BTS web page for this package.

Thanks.

--- End Message ---

--- Begin Message ---

Source: napari
Source-Version: 0.5.6-1
Done: Roland Mas <lola...@debian.org>

We believe that the bug you reported is fixed in the latest version of
napari, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1095...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Roland Mas <lola...@debian.org> (supplier of updated napari package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Fri, 14 Mar 2025 17:55:20 +0100
Source: napari
Architecture: source
Version: 0.5.6-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Team <team+pyt...@tracker.debian.org>
Changed-By: Roland Mas <lola...@debian.org>
Closes: 1095359
Changes:
 napari (0.5.6-1) unstable; urgency=medium
 .
   * New upstream release.
   * Add missing Build-Depends.
   * Bug fix: "FTBFS: E   ImportError: numpy.core.multiarray failed to
     import", thanks to Santiago Vila (Closes: #1095359).
Checksums-Sha1:
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 915f293ef42f4ab1856e5ff2eb3809a2af3be925 2998023 napari_0.5.6.orig.tar.gz
 c18b5a2e34ddd265261fabd4b6f173be1c5342a3 5588 napari_0.5.6-1.debian.tar.xz
 be14e6c28dcc2bf6b509fe420cd637d05d99a447 19870 napari_0.5.6-1_amd64.buildinfo
Checksums-Sha256:
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napari_0.5.6-1.dsc
 a9f60c65506cd93b88797cb9ca24978f3f3c81cb2b076bea9291c64da42c57bc 2998023 
napari_0.5.6.orig.tar.gz
 18bea92444c5acf340bf031c749a088e6ed92aeef456c2665918c1a15725391d 5588 
napari_0.5.6-1.debian.tar.xz
 e37ea72dbaef4d48e0758b2eccf2e673bbbbb6e83f4c2f8dd6468d8ce1988ba4 19870 
napari_0.5.6-1_amd64.buildinfo
Files:
 12e4ab15f4fb555ef3173c9e8a569207 3636 python optional napari_0.5.6-1.dsc
 473574283800a66715cf25cd83ae41e2 2998023 python optional 
napari_0.5.6.orig.tar.gz
 50a4b960fb79c8e34c5a39fde54e2dce 5588 python optional 
napari_0.5.6-1.debian.tar.xz
 35264f278ae1c0e9baf7687e47d6e0f8 19870 python optional 
napari_0.5.6-1_amd64.buildinfo

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--- End Message ---