Your message dated Mon, 17 Feb 2025 22:49:55 +0000
with message-id <e1tk9w3-001tmt...@fasolo.debian.org>
and subject line Bug#1018312: fixed in bcbio 1.2.9-3
has caused the Debian Bug report #1018312,
regarding bcbio: build-depends on python3-nose or uses it for autopkgtest
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1018312: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1018312
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: bcbio
Version: 1.2.9-1
User: python-modules-t...@lists.alioth.debian.org
Usertags: nose-rm
Dear Maintainer,
Your package still uses nose [1], which is an obsolete testing framework for
Python, dead and unmaintained since 2015 [2][3].
If you received this bug report, it means that your package either has a
build-dependency on python3-nose or uses that package in debian/tests/control.
If that is not the case, please reply and CC me explicitly.
Please port your package to one of the alternatives: nose2 [4], pytest [5]
or unittest from Python standard library [6].
There is a script called nose2pytest [7] which can assist with migrating from
nose to pytest.
This mass bug filing was discussed on debian-devel in [8].
[1]: https://tracker.debian.org/pkg/nose
[2]: https://github.com/nose-devs/nose/commit/0f40fa995384afad
[3]: https://pypi.org/project/nose/#history
[4]: https://docs.nose2.io/en/latest/
[5]: https://docs.pytest.org/en/latest/
[6]: https://docs.python.org/3/library/unittest.html
[7]: https://github.com/pytest-dev/nose2pytest
[8]: https://lists.debian.org/debian-devel/2022/08/msg00184.html
--
Dmitry Shachnev
--- End Message ---
--- Begin Message ---
Source: bcbio
Source-Version: 1.2.9-3
Done: Andreas Tille <ti...@debian.org>
We believe that the bug you reported is fixed in the latest version of
bcbio, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1018...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <ti...@debian.org> (supplier of updated bcbio package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 07 Feb 2025 10:58:48 +0100
Source: bcbio
Architecture: source
Version: 1.2.9-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team
<debian-med-packag...@lists.alioth.debian.org>
Changed-By: Andreas Tille <ti...@debian.org>
Closes: 1018312
Changes:
bcbio (1.2.9-3) unstable; urgency=medium
.
* Team upload.
* Drop python3-seqcluster from Build-Depends and downgrade from
Recommends to Suggests
* Fix lintian-overrides about script-with-language-extension
* DEP3
* Do not ship empty manpage
* Use pytest instead of node
Closes: #1018312
* Standards-Version: 4.6.2 (routine-update)
* Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
.
[ Alexandre Detiste ]
* Release this now to allow python3-nose removal (Closes: #1018312)
Checksums-Sha1:
08ea882f6ec5ccd26af7717778b66e7a4ad43d17 3539 bcbio_1.2.9-3.dsc
f90f212b1438c148fd14c192d025d4ce0e890df3 15320 bcbio_1.2.9-3.debian.tar.xz
291a7ac871931bb2780532f89b96dbdbc3769648 34206 bcbio_1.2.9-3_source.buildinfo
Checksums-Sha256:
7e8ae2caf28615d6a205ce9e050b523b87dcfd830dcaf1ef7a4dbe045bdaf839 3539
bcbio_1.2.9-3.dsc
b987d04bbf377b8bd4676f8de8078d90c2de09e315bc7d2beba8bac179cd9e7f 15320
bcbio_1.2.9-3.debian.tar.xz
96deb4cc0c6d03c827f3bb5e77e425b7d9f3a1c75f5b451e76252f96f5914cb9 34206
bcbio_1.2.9-3_source.buildinfo
Files:
49f1f21bc251dd0bb251a90306353311 3539 contrib/science optional
bcbio_1.2.9-3.dsc
5ef7c4295d695a3f2444ba180f89b799 15320 contrib/science optional
bcbio_1.2.9-3.debian.tar.xz
5153a9090908fb7b4c38b9daf6acfabc 34206 contrib/science optional
bcbio_1.2.9-3_source.buildinfo
-----BEGIN PGP SIGNATURE-----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=79bP
-----END PGP SIGNATURE-----
pgpBuUDXnWVHz.pgp
Description: PGP signature
--- End Message ---
