Your message dated Sat, 15 Feb 2025 13:52:12 +0000
with message-id <e1tjiaa-006ixv...@fasolo.debian.org>
and subject line Bug#1091919: fixed in r-cran-seurat 5.2.1-4
has caused the Debian Bug report #1091919,
regarding r-cran-seurat: autopkgtest regression on riscv64 and s390x
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
1091919: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1091919
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: r-cran-seurat
Version: 5.1.0-1
Severity: serious
User: debian...@lists.debian.org
Usertags: regression
Hi Maintainer
Since the upload of 5.1.0-1, r-cran-seurat has been failing its own
autopkgtests on riscv64 [1] and s390x [2] where it succeeded
previously.
I've copied what I hope is the relevant part of the log below.
Regards
Graham
[1] https://ci.debian.net/packages/r/r-cran-seurat/testing/riscv64/
[2] https://ci.debian.net/packages/r/r-cran-seurat/testing/s390x/
185s ══ Failed tests
════════════════════════════════════════════════════════════════
185s ── Failure ('test_integration5.R:86:3'): IntegrateLayers works
with CCAIntegration ──
185s abs(x) not equal to abs(y).
185s 1/1 mismatches
185s [1] 1.08 - 0.917 == 0.165
185s Backtrace:
185s ▆
185s 1. └─Seurat (local) expect_abs_equal(...) at test_integration5.R:86:3
185s 2. └─testthat::expect_equal(abs(x), abs(y), tolerance =
tolerance) at test_integration5.R:7:3
185s ── Failure ('test_integration5.R:90:3'): IntegrateLayers works
with CCAIntegration ──
185s abs(x) not equal to abs(y).
185s 1/1 mismatches
185s [1] 1.38 - 1.49 == -0.107
185s Backtrace:
185s ▆
185s 1. └─Seurat (local) expect_abs_equal(...) at test_integration5.R:90:3
185s 2. └─testthat::expect_equal(abs(x), abs(y), tolerance =
tolerance) at test_integration5.R:7:3
185s
185s [ FAIL 2 | WARN 210 | SKIP 32 | PASS 659 ]
186s Error: Test failures
--- End Message ---
--- Begin Message ---
Source: r-cran-seurat
Source-Version: 5.2.1-4
Done: Michael R. Crusoe <cru...@debian.org>
We believe that the bug you reported is fixed in the latest version of
r-cran-seurat, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1091...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael R. Crusoe <cru...@debian.org> (supplier of updated r-cran-seurat
package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sat, 15 Feb 2025 14:39:29 +0100
Source: r-cran-seurat
Architecture: source
Version: 5.2.1-4
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-t...@alioth-lists.debian.net>
Changed-By: Michael R. Crusoe <cru...@debian.org>
Closes: 1091919
Changes:
r-cran-seurat (5.2.1-4) unstable; urgency=medium
.
* Team upload.
* d/test/control: skip autopkgtests on s390x and riscv64. Closes: #1091919
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