Your message dated Tue, 11 Feb 2025 00:51:01 +0000
with message-id <e1theup-0017lb...@fasolo.debian.org>
and subject line Bug#1094808: fixed in mdanalysis 2.8.0-1
has caused the Debian Bug report #1094808,
regarding mdanalysis: autopkgtests fail with numpy 2.x
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1094808: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1094808
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: mdanalysis
Version: 2.7.0-5
Severity: serious
Control: block 1082237 by -1
https://ci.debian.net/packages/m/mdanalysis/unstable/amd64/57222416/
Many different failures.
-- System Information:
Debian Release: trixie/sid
APT prefers unstable
APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386
Kernel: Linux 6.12.8-amd64 (SMP w/16 CPU threads; PREEMPT)
Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=ru_RU.UTF-8, LC_CTYPE=ru_RU.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
--- End Message ---
--- Begin Message ---
Source: mdanalysis
Source-Version: 2.8.0-1
Done: Drew Parsons <dpars...@debian.org>
We believe that the bug you reported is fixed in the latest version of
mdanalysis, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1094...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Drew Parsons <dpars...@debian.org> (supplier of updated mdanalysis package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 10 Feb 2025 20:13:19 +0100
Source: mdanalysis
Architecture: source
Version: 2.8.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Drew Parsons <dpars...@debian.org>
Closes: 1094808
Changes:
mdanalysis (2.8.0-1) unstable; urgency=medium
.
* New upstream release
- supports Numpy 2. Closes: #1094808.
- applies debian patch xdr_type_PR4408.patch
* drop logo exclusions (logo files no longer shipped upstream)
Drop debian patch docs_no_logo.patch.
* update debian/watch to latest uscan recommendations
(without renaming for DFSG logo exclusion)
* debian patch test_skip_missing_modules.patch skips test_hole2,
test_psa, test_waterdynamics when mdahole2, pathsimanalysis,
waterdynamics are not available (they are not yet packaged for
debian)
- and skip test_all_import[.analysis.hole2], journal.pcbi.1004568
(duecredit test accessing pathsimanalysis)
* run tests with --disable-pytest-warnings as recommended upstream
* don't ignore build-time test errors.
Apply i386 and s390x test skips in debian/tests to debian/rules.
* delete .duecredit.p generated by tests (otherwise gets installed)
* after dh_python3, remove leftover python3.* files (dist files not
generated cleanly)
Checksums-Sha1:
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75849e2c9e52638f788c06381a531dc5b0c65c5f 60779158 mdanalysis_2.8.0.orig.tar.gz
d23ec5383fdb1763d2553f70eb35393a94c7c35f 10948 mdanalysis_2.8.0-1.debian.tar.xz
Checksums-Sha256:
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mdanalysis_2.8.0-1.dsc
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ece32d17945b2276875774940c07bc5fc1fe5f58c5d5d54fafff7ed851b96aa1 10948
mdanalysis_2.8.0-1.debian.tar.xz
Files:
063a0a0f21d7983620fe2742e40c1a51 2861 python optional mdanalysis_2.8.0-1.dsc
fe738623c1bdce9e2bd7be4836a012f6 60779158 python optional
mdanalysis_2.8.0.orig.tar.gz
11a1c89fd5e2c819e548f1c7151167cf 10948 python optional
mdanalysis_2.8.0-1.debian.tar.xz
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