Package: src:python-mne
Version: 1.8.0-1
Severity: serious
Tags: ftbfs trixie sid
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules clean
dh clean --buildsystem pybuild
dh_auto_clean -O--buildsystem=pybuild
dh_autoreconf_clean -O--buildsystem=pybuild
debian/rules execute_before_dh_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
rm -rf *.egg-info
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_clean -O--buildsystem=pybuild
debian/rules binary
dh binary --buildsystem pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_autoreconf -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
[... snipped ...]
Preparing the mapping matrix...
Truncating at 14/14 components and regularizing with α=1.0e-01
Reading 0 ... 60 = 0.000 ... 0.100 secs...
Setting channel interpolation method to {'meg': 'MNE'}.
Interpolating bad channels.
Automatic origin fit: head of radius 96.4 mm
Computing dot products for 1 MEG channel...
Computing cross products for 1 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 1/1 components to omit less than 0.0001 (0)
[32mPASSED[0m
mne/channels/tests/test_interpolation.py::test_interpolation_meg Opening raw
data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Not setting metadata
7 matching events found
Setting baseline interval to [-0.19979521315838786, 0.0] s
Applying baseline correction (mode: mean)
Created an SSP operator (subspace dimension = 3)
3 projection items activated
Loading data for 7 events and 421 original time points ...
0 bad epochs dropped
Reading 0 ... 60 = 0.000 ... 0.100 secs...
Setting channel interpolation method to {'meg': 'MNE'}.
Interpolating bad channels.
Automatic origin fit: head of radius 91.0 mm
Computing dot products for 98 MEG channels...
Computing cross products for 98 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 73/98 components to omit less than 0.0001 (9.5e-05)
Creating RawArray with float64 data, n_channels=100, n_times=421
Range : 0 ... 420 = 0.000 ... 0.699 secs
Ready.
Setting channel interpolation method to {'meg': 'MNE'}.
Interpolating bad channels.
Automatic origin fit: head of radius 91.0 mm
Computing dot products for 99 MEG channels...
Computing cross products for 99 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 74/99 components to omit less than 0.0001 (9.4e-05)
Setting channel interpolation method to {'meg': 'MNE'}.
Interpolating bad channels.
Automatic origin fit: head of radius 91.0 mm
Computing dot products for 99 MEG channels...
Computing cross products for 99 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 74/99 components to omit less than 0.0001 (9.4e-05)
Setting channel interpolation method to {'meg': 'MNE'}.
Interpolating bad channels.
Automatic origin fit: head of radius 91.0 mm
Computing dot products for 99 MEG channels...
Computing cross products for 99 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 60/99 components to omit less than 0.0001 (9.8e-05)
Setting channel interpolation method to {'meg': 'MNE'}.
Interpolating bad channels.
Automatic origin fit: head of radius 91.0 mm
Computing dot products for 98 MEG channels...
Computing cross products for 98 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 60/98 components to omit less than 0.0001 (9.4e-05)
[32mPASSED[0m
mne/channels/tests/test_interpolation.py::test_interpolate_meg_ctf Opening raw
data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_ctf_raw.fif...
Read 5 compensation matrices
Range : 24000 ... 31200 = 10.000 ... 13.000 secs
Ready.
Current compensation grade : 0
Reading 0 ... 2400 = 0.000 ... 1.000 secs...
Compensator constructed to change 0 -> 3
Applying compensator to loaded data
Removing 5 compensators from info because not all compensation channels were
picked.
Computing dot products for 303 MEG channels...
Computing cross products for 303 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 92/303 components to omit less than 0.0001 (9.9e-05)
Removing 5 compensators from info because not all compensation channels were
picked.
Removing 5 compensators from info because not all compensation channels were
picked.
Computing dot products for 274 MEG channels...
Computing cross products for 274 â 1 MEG channel...
Preparing the mapping matrix...
Truncating at 92/274 components to omit less than 0.0001 (9.9e-05)
Corrcoef of interpolated with original channel: {'no_refmeg':
0.8500877951710595, 'with_refmeg': 0.7714578504554638}
[32mPASSED[0m
mne/channels/tests/test_interpolation.py::test_interpolation_ctf_comp
[33mSKIPPED[0m
mne/channels/tests/test_interpolation.py::test_interpolation_nirs
[33mSKIPPED[0m
mne/channels/tests/test_interpolation.py::test_interpolation_ecog
[33mSKIPPED[0m
mne/channels/tests/test_interpolation.py::test_interpolation_seeg
[33mSKIPPED[0m
mne/channels/tests/test_interpolation.py::test_nan_interpolation Opening raw
data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Reading 0 ... 14399 = 0.000 ... 23.974 secs...
Setting channel interpolation method to {'meg': 'nan'}.
Interpolating bad channels.
Setting channel interpolation method to {'meg': 'nan'}.
Interpolating bad channels.
[32mPASSED[0m
mne/channels/tests/test_interpolation.py::test_method_str [33mSKIPPED[0m
(R...)
mne/channels/tests/test_layout.py::test_io_layout_lout [32mPASSED[0m
mne/channels/tests/test_layout.py::test_io_layout_lay [32mPASSED[0m
mne/channels/tests/test_layout.py::test_find_topomap_coords Read a total of
3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
[32mPASSED[0m
mne/channels/tests/test_layout.py::test_make_eeg_layout Read a total of 3
projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
[32mPASSED[0m
mne/channels/tests/test_layout.py::test_make_grid_layout [32mPASSED[0m
mne/channels/tests/test_layout.py::test_find_layout Read a total of 3
projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Read 5 compensation matrices
Extracting SQD Parameters from
/<<PKGBUILDDIR>>/mne/io/kit/tests/data/test.sqd...
Creating Raw.info structure...
Setting channel info structure...
Creating Info structure...
Ready.
Extracting SQD Parameters from
/<<PKGBUILDDIR>>/mne/io/kit/tests/data/test_umd-raw.sqd...
Creating Raw.info structure...
Setting channel info structure...
Creating Info structure...
Ready.
[32mPASSED[0m
mne/channels/tests/test_layout.py::test_box_size [32mPASSED[0m
mne/channels/tests/test_layout.py::test_generate_2d_layout [32mPASSED[0m
mne/channels/tests/test_layout.py::test_layout_copy [32mPASSED[0m
mne/channels/tests/test_layout.py::test_layout_pick[picks0-exclude0]
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mne/channels/tests/test_layout.py::test_layout_pick[picks1-exclude1]
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mne/channels/tests/test_layout.py::test_layout_pick[None-exclude2]
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mne/channels/tests/test_layout.py::test_layout_pick[None-exclude4]
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mne/channels/tests/test_layout.py::test_layout_pick[None-2_1] [32mPASSED[0m
mne/channels/tests/test_layout.py::test_layout_pick[all-2_0] [32mPASSED[0m
mne/channels/tests/test_layout.py::test_layout_pick[all-2_1] [32mPASSED[0m
mne/channels/tests/test_layout.py::test_layout_pick[picks8-exclude8]
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mne/channels/tests/test_layout.py::test_layout_pick_more [32mPASSED[0m
mne/channels/tests/test_layout.py::test_layout_pick_errors [32mPASSED[0m
mne/channels/tests/test_montage.py::test_dig_montage_trans [32mPASSED[0m
mne/channels/tests/test_montage.py::test_fiducials [32mPASSED[0m
mne/channels/tests/test_montage.py::test_documented [32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_readers[sfp_duplicate]
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mne/channels/tests/test_montage.py::test_montage_readers[sfp_headshape]
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mne/channels/tests/test_montage.py::test_montage_readers[EEGLAB] [32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_readers[matlab] [32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_readers[ASA electrode]
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_readers[generic theta-phi
(txt)] [32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_readers[BESA spherical model]
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_readers[legacy mne-c]
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mne/channels/tests/test_montage.py::test_montage_readers[CSV file]
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mne/channels/tests/test_montage.py::test_montage_readers[XYZ file]
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mne/channels/tests/test_montage.py::test_montage_readers[TSV file]
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_readers[brainvision]
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_read_locs [33mSKIPPED[0m
(Requires...)
mne/channels/tests/test_montage.py::test_read_dig_dat [32mPASSED[0m
mne/channels/tests/test_montage.py::test_read_dig_montage_using_polhemus_fastscan
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_read_dig_montage_using_polhemus_fastscan_error_handling
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_read_dig_polhemus_isotrak_hsp
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_read_dig_polhemus_isotrak_elp
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_read_dig_polhemus_isotrak_eeg
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_read_dig_polhemus_isotrak_error_handling
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_combining_digmontage_objects
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_combining_digmontage_forbiden_behaviors
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_dig_montage [32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_dig_montage_with_nan_positions
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_fif_dig_montage [33mSKIPPED[0m
(Re...)
mne/channels/tests/test_montage.py::test_egi_dig_montage [33mSKIPPED[0m
(Re...)
mne/channels/tests/test_montage.py::test_read_dig_captrak [33mSKIPPED[0m
(R...)
mne/channels/tests/test_montage.py::test_set_montage_mgh[raw] Opening raw data
file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Normal return from subroutine COBYLA
NFVALS = 125 F = 1.804228E-03 MAXCV = 0.000000E+00
X =-1.021112E-03 1.455380E-02 4.140431E-02 9.708486E-02
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_montage_mgh[montage] Opening raw
data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Normal return from subroutine COBYLA
NFVALS = 125 F = 1.804228E-03 MAXCV = 0.000000E+00
X =-1.021112E-03 1.455380E-02 4.140431E-02 9.708486E-02
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_montage_mgh[custom] Opening raw
data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Normal return from subroutine COBYLA
NFVALS = 125 F = 1.804228E-03 MAXCV = 0.000000E+00
X =-1.021112E-03 1.455380E-02 4.140431E-02 9.708486E-02
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_positions_similar[fname0-mgh60-60-59-bads0]
Opening raw data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Reading 0 ... 14399 = 0.000 ... 23.974 secs...
Filtering raw data in 1 contiguous segment
Setting up low-pass filter at 40 Hz
FIR filter parameters
---------------------
Designing a one-pass, zero-phase, non-causal lowpass filter:
- Windowed time-domain design (firwin) method
- Hamming window with 0.0194 passband ripple and 53 dB stopband attenuation
- Upper passband edge: 40.00 Hz
- Upper transition bandwidth: 10.00 Hz (-6 dB cutoff frequency: 45.00 Hz)
- Filter length: 199 samples (0.331 s)
[Parallel(n_jobs=1)]: Done 17 tasks | elapsed: 0.0s
Fitted sphere radius: 91.0 mm
Origin head coordinates: -4.1 16.0 51.8 mm
Origin device coordinates: 1.4 17.8 -10.3 mm
Fitted sphere radius: 96.3 mm
Origin head coordinates: -0.9 14.6 43.0 mm
Origin device coordinates: 3.6 17.8 -19.5 mm
Setting channel interpolation method to {'eeg': 'spline'}.
Interpolating bad channels.
Automatic origin fit: head of radius 91.0 mm
Computing interpolation matrix from 53 sensor positions
Interpolating 6 sensors
Setting channel interpolation method to {'eeg': 'spline'}.
Interpolating bad channels.
Automatic origin fit: head of radius 96.3 mm
Computing interpolation matrix from 53 sensor positions
Interpolating 6 sensors
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_positions_similar[fname1-mgh70-70-64-None]
[33mSKIPPED[0m
mne/channels/tests/test_montage.py::test_digmontage_constructor_errors
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_transform_to_head_and_compute_dev_head_t
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_montage_with_mismatching_ch_names
Opening raw data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_montage_with_sub_super_set_of_ch_names
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_montage_with_known_aliases
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_heterogeneous_ch_type Creating
RawArray with float64 data, n_channels=4, n_times=1
Range : 0 ... 0 = 0.000 ... 0.000 secs
Ready.
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_set_montage_coord_frame_in_head_vs_unknown
Creating RawArray with float64 data, n_channels=3, n_times=1
Range : 0 ... 0 = 0.000 ... 0.000 secs
Ready.
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_head_frame[eeg]
[33mSKIPPED[0m
mne/channels/tests/test_montage.py::test_montage_head_frame[ecog]
[33mSKIPPED[0m
mne/channels/tests/test_montage.py::test_montage_head_frame[seeg]
[33mSKIPPED[0m
mne/channels/tests/test_montage.py::test_montage_head_frame[dbs]
[33mSKIPPED[0m
mne/channels/tests/test_montage.py::test_set_montage_with_missing_coordinates
Creating RawArray with float64 data, n_channels=3, n_times=1
Range : 0 ... 0 = 0.000 ... 0.000 secs
Ready.
[32mPASSED[0m
mne/channels/tests/test_montage.py::test_get_montage [33mSKIPPED[0m
(Requir...)
mne/channels/tests/test_montage.py::test_read_dig_hpts [32mPASSED[0m
mne/channels/tests/test_montage.py::test_get_builtin_montages [32mPASSED[0m
mne/channels/tests/test_montage.py::test_plot_montage [33mSKIPPED[0m
(Requi...)
mne/channels/tests/test_montage.py::test_montage_equality [32mPASSED[0m
mne/channels/tests/test_montage.py::test_montage_add_fiducials [33mSKIPPED[0m
mne/channels/tests/test_montage.py::test_read_dig_localite [32mPASSED[0m
mne/channels/tests/test_montage.py::test_make_wrong_dig_montage [32mPASSED[0m
mne/channels/tests/test_montage.py::test_fnirs_montage [33mSKIPPED[0m
(Requ...)
mne/channels/tests/test_standard_montage.py::test_standard_montages_have_fids[standard_1005]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_have_fids[standard_1020]
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mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[easycap-M10-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[easycap-M10-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi128-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi128-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi16-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi16-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi160-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi160-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi256-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi256-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi32-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi32-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi64-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[biosemi64-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[brainproducts-RNP-BA-128-1e-08-0.095]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_montages_on_sphere[brainproducts-RNP-BA-128-1e-08-0.05]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_standard_superset
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_set_montage_artinis_fsaverage[octamon]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_set_montage_artinis_fsaverage[brite23]
[32mPASSED[0m
mne/channels/tests/test_standard_montage.py::test_set_montage_artinis_basic
Creating RawArray with float64 data, n_channels=16, n_times=100
Range : 0 ... 99 = 0.000 ... 9.900 secs
Ready.
Creating RawArray with float64 data, n_channels=46, n_times=100
Range : 0 ... 99 = 0.000 ... 9.900 secs
Ready.
Creating RawArray with float64 data, n_channels=46, n_times=100
Range : 0 ... 99 = 0.000 ... 9.900 secs
Ready.
Creating RawArray with float64 data, n_channels=2, n_times=100
Range : 0 ... 99 = 0.000 ... 9.900 secs
Ready.
Creating RawArray with float64 data, n_channels=2, n_times=100
Range : 0 ... 99 = 0.000 ... 9.900 secs
Ready.
Creating RawArray with float64 data, n_channels=2, n_times=100
Range : 0 ... 99 = 0.000 ... 9.900 secs
Ready.
[32mPASSED[0m
mne/channels/tests/test_unify_bads.py::test_error_raising Opening raw data file
/<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Reading 0 ... 14399 = 0.000 ... 23.974 secs...
Opening raw data file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Not setting metadata
1 matching events found
Setting baseline interval to [-0.09989760657919393, 0.0] s
Applying baseline correction (mode: mean)
Created an SSP operator (subspace dimension = 3)
Loading data for 1 events and 662 original time points ...
0 bad epochs dropped
[32mPASSED[0m
mne/channels/tests/test_unify_bads.py::test_bads_compilation Opening raw data
file /<<PKGBUILDDIR>>/mne/io/tests/data/test_raw.fif...
Read a total of 3 projection items:
PCA-v1 (1 x 102) idle
PCA-v2 (1 x 102) idle
PCA-v3 (1 x 102) idle
Range : 25800 ... 40199 = 42.956 ... 66.930 secs
Ready.
Reading 0 ... 14399 = 0.000 ... 23.974 secs...
[32mPASSED[0m
mne/commands/tests/test_commands.py::test_browse_raw [32mPASSED[0m
mne/commands/tests/test_commands.py::test_what [32mPASSED[0m
mne/commands/tests/test_commands.py::test_bti2fiff [32mPASSED[0m
mne/commands/tests/test_commands.py::test_compare_fiff [32mPASSED[0m
mne/commands/tests/test_commands.py::test_show_fiff [32mPASSED[0m
mne/commands/tests/test_commands.py::test_clean_eog_ecg [33mSKIPPED[0m
(Req...)
mne/commands/tests/test_commands.py::test_compute_proj_exg[mne.commands.mne_compute_proj_ecg]
[32mPASSED[0m
mne/commands/tests/test_commands.py::test_compute_proj_exg[mne.commands.mne_compute_proj_eog]
[32mPASSED[0m
mne/commands/tests/test_commands.py::test_coreg [32mPASSED[0m
mne/commands/tests/test_commands.py::test_kit2fiff [32mPASSED[0m
mne/commands/tests/test_commands.py::test_make_scalp_surfaces [33mSKIPPED[0m
mne/commands/tests/test_commands.py::test_report [33mSKIPPED[0m (Requires
t...)
mne/commands/tests/test_commands.py::test_surf2bem [32mPASSED[0m
mne/commands/tests/test_commands.py::test_watershed_bem [33mSKIPPED[0m
(Req...)
mne/commands/tests/test_commands.py::test_flash_bem [33mSKIPPED[0m
(Require...)
mne/commands/tests/test_commands.py::test_setup_source_space [33mSKIPPED[0m
mne/commands/tests/test_commands.py::test_setup_forward_model [33mSKIPPED[0m
mne/commands/tests/test_commands.py::test_mne_prepare_bem_model [33mSKIPPED[0m
mne/commands/tests/test_commands.py::test_show_info [32mPASSED[0m
mne/commands/tests/test_commands.py::test_sys_info Fatal Python error:
Segmentation fault
Current thread 0x00007f24f9b14080 (most recent call first):
File "<frozen importlib._bootstrap>", line 488 in _call_with_frames_removed
File "<frozen importlib._bootstrap_external>", line 1320 in create_module
File "<frozen importlib._bootstrap>", line 813 in module_from_spec
File "<frozen importlib._bootstrap>", line 921 in _load_unlocked
File "<frozen importlib._bootstrap>", line 1331 in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 1360 in _find_and_load
File "/usr/lib/python3/dist-packages/vtk.py", line 4 in <module>
File "<frozen importlib._bootstrap>", line 488 in _call_with_frames_removed
File "<frozen importlib._bootstrap_external>", line 1026 in exec_module
File "<frozen importlib._bootstrap>", line 935 in _load_unlocked
File "<frozen importlib._bootstrap>", line 1331 in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 1360 in _find_and_load
File "<frozen importlib._bootstrap>", line 1387 in _gcd_import
File "/usr/lib/python3.13/importlib/__init__.py", line 88 in import_module
File "/<<PKGBUILDDIR>>/mne/utils/config.py", line 765 in sys_info
File "/<<PKGBUILDDIR>>/mne/commands/mne_sys_info.py", line 58 in run
File "/<<PKGBUILDDIR>>/mne/commands/tests/test_commands.py", line 527 in
test_sys_info
File "/usr/lib/python3/dist-packages/_pytest/python.py", line 159 in
pytest_pyfunc_call
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513 in __call__
File "/usr/lib/python3/dist-packages/_pytest/python.py", line 1627 in runtest
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 174 in
pytest_runtest_call
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513 in __call__
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 242 in <lambda>
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 341 in from_call
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 241 in
call_and_report
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 132 in
runtestprotocol
File "/usr/lib/python3/dist-packages/_pytest/runner.py", line 113 in
pytest_runtest_protocol
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513 in __call__
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 362 in
pytest_runtestloop
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513 in __call__
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 337 in _main
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 283 in
wrap_session
File "/usr/lib/python3/dist-packages/_pytest/main.py", line 330 in
pytest_cmdline_main
File "/usr/lib/python3/dist-packages/pluggy/_callers.py", line 103 in
_multicall
File "/usr/lib/python3/dist-packages/pluggy/_manager.py", line 120 in
_hookexec
File "/usr/lib/python3/dist-packages/pluggy/_hooks.py", line 513 in __call__
File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 175 in
main
File "/usr/lib/python3/dist-packages/_pytest/config/__init__.py", line 201 in
console_main
File "/usr/bin/py.test", line 8 in <module>
Extension modules: numpy.core._multiarray_umath, numpy.core._multiarray_tests,
numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal,
numpy.random._common, numpy.random.bit_generator,
numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand,
numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64,
numpy.random._generator, scipy._lib._ccallback_c, scipy.special._ufuncs_cxx,
scipy.special._ufuncs, scipy.special._specfun, scipy.special._comb,
scipy.linalg._fblas, scipy.linalg._flapack, scipy.linalg.cython_lapack,
scipy.linalg._cythonized_array_utils, scipy.linalg._solve_toeplitz,
scipy.linalg._decomp_lu_cython, scipy.linalg._matfuncs_sqrtm_triu,
scipy.linalg.cython_blas, scipy.linalg._matfuncs_expm,
scipy.linalg._decomp_update, scipy.sparse._sparsetools, _csparsetools,
scipy.sparse._csparsetools, scipy.sparse.linalg._dsolve._superlu,
scipy.sparse.linalg._eigen.arpack._arpack,
scipy.sparse.linalg._propack._spropack, scipy.sparse.linalg._propack._dpropack,
sci
py.sparse.linalg._propack._cpropack, scipy.sparse.linalg._propack._zpropack,
scipy.sparse.csgraph._tools, scipy.sparse.csgraph._shortest_path,
scipy.sparse.csgraph._traversal, scipy.sparse.csgraph._min_spanning_tree,
scipy.sparse.csgraph._flow, scipy.sparse.csgraph._matching,
scipy.sparse.csgraph._reordering, scipy.special._ellip_harm_2,
scipy.interpolate._fitpack, scipy.interpolate._dfitpack,
scipy.optimize._group_columns, scipy._lib.messagestream,
scipy.optimize._trlib._trlib, scipy.optimize._lbfgsb, _moduleTNC,
scipy.optimize._moduleTNC, scipy.optimize._cobyla, scipy.optimize._slsqp,
scipy.optimize._minpack, scipy.optimize._lsq.givens_elimination,
scipy.optimize._zeros, scipy.optimize._highs.cython.src._highs_wrapper,
scipy.optimize._highs._highs_wrapper,
scipy.optimize._highs.cython.src._highs_constants,
scipy.optimize._highs._highs_constants, scipy.linalg._interpolative,
scipy.optimize._bglu_dense, scipy.optimize._lsap, scipy.spatial._ckdtree,
scipy.spatial._qhull, scipy.spatia
l._voronoi, scipy.spatial._distance_wrap, scipy.spatial._hausdorff,
scipy.spatial.transform._rotation, scipy.optimize._direct,
scipy.interpolate._bspl, scipy.interpolate._ppoly, scipy.interpolate.interpnd,
scipy.interpolate._rbfinterp_pythran, scipy.interpolate._rgi_cython,
scipy.io.matlab._mio_utils, scipy.io.matlab._streams,
scipy.io.matlab._mio5_utils, scipy.ndimage._nd_image, _ni_label,
scipy.ndimage._ni_label, scipy.signal._sigtools, scipy._lib._uarray._uarray,
scipy.signal._max_len_seq_inner, scipy.signal._upfirdn_apply,
scipy.signal._spline, scipy.signal._sosfilt, scipy.signal._spectral,
scipy.integrate._odepack, scipy.integrate._quadpack, scipy.integrate._vode,
scipy.integrate._dop, scipy.integrate._lsoda, scipy.special.cython_special,
scipy.stats._stats, scipy.stats._biasedurn, scipy.stats._levy_stable.levyst,
scipy.stats._stats_pythran, scipy.stats._ansari_swilk_statistics,
scipy.stats._sobol, scipy.stats._qmc_cy, scipy.stats._mvn,
scipy.stats._rcont.rcont, scipy.stats._un
uran.unuran_wrapper, scipy.signal._peak_finding_utils,
matplotlib._c_internal_utils, PIL._imaging, matplotlib._path, kiwisolver._cext,
matplotlib._image, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtTest,
sklearn.__check_build._check_build, lz4._version, lz4.frame._frame,
sklearn.utils._isfinite, sklearn.utils.murmurhash,
sklearn.utils._openmp_helpers, scipy.fftpack.convolve, markupsafe._speedups
(total: 124)
Segmentation fault
make[1]: *** [debian/rules:23: override_dh_auto_test] Error 139
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
make: *** [debian/rules:14: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202501/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and add an affects on src:python-mne, so that this is still
visible in the BTS web page for this package.
Thanks.
