Your message dated Mon, 28 Oct 2024 13:16:26 +0100
with message-id <bb5de777-8a48-4ff3-bb3e-557211125...@debian.org>
and subject line Re: r-cran-gert: FTBFS: utils.h:28:29: error: passing argument
10 of ‘git_commit_create’ from incompatible pointer type
[-Wincompatible-pointer-types]
has caused the Debian Bug report #1084351,
regarding r-cran-gert: FTBFS: utils.h:28:29: error: passing argument 10 of
‘git_commit_create’ from incompatible pointer type
[-Wincompatible-pointer-types]
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1084351: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1084351
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:r-cran-gert
Version: 2.1.2+dfsg-1
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --buildsystem R
dh_update_autotools_config -O--buildsystem=R
dh_autoreconf -O--buildsystem=R
dh_auto_configure -O--buildsystem=R
dh_auto_build -O--buildsystem=R
debian/rules execute_after_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cd inst/doc && Rscript -e "require(knitr); require(markdown); knit('gert.Rmd', 'gert.md');
markdownToHTML('gert.md', 'gert.html', options=c('use_xhtml', 'base64_images'));" && rm -f
gert.md
Loading required package: knitr
Loading required package: markdown
processing file: gert.Rmd
1/16
2/16 [unnamed-chunk-1]
3/16
4/16 [setup]
5/16
6/16 [unnamed-chunk-2]
7/16
8/16 [unnamed-chunk-3]
9/16
10/16 [unnamed-chunk-4]
11/16
12/16 [unnamed-chunk-5]
13/16
14/16 [unnamed-chunk-6]
15/16
16/16 [unnamed-chunk-7]
output file: gert.md
[1] "gert.md"
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_test -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=R
dh_prep -O--buildsystem=R
dh_auto_install --destdir=debian/r-cran-gert/ -O--buildsystem=R
I: R packages needed for DEP8: spelling, rmarkdown, testthat, ca-certificates
I: R Package: gert Version: 2.1.2
I: Building using R version 4.4.1-3
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Wed, 25 Sep 2024 08:26:53 +0900
mkdir -p
/<<BUILDDIR>>/r-cran-gert-2.1.2\+dfsg/debian/r-cran-gert/usr/lib/R/site-library
R CMD INSTALL -l
/<<BUILDDIR>>/r-cran-gert-2.1.2\+dfsg/debian/r-cran-gert/usr/lib/R/site-library --clean .
"--built-timestamp='Wed, 25 Sep 2024 08:26:53 +0900'"
* installing *source* package ‘gert’ ...
file ‘inst/doc/gert.html’ has the wrong MD5 checksum
** using staged installation
Found pkg-config cflags and libs!
Using PKG_CFLAGS=
Using PKG_LIBS=-lgit2
Configuration OK!
** libs
using C compiler: ‘gcc (Debian 14.2.0-6) 14.2.0’
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
rm -f gert.so branch.o clone.o commit.o config.o conflicts.o files.o ignore.o
init.o merge.o rebase.o stash.o submodules.o tag.o utils.o version.o
gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS
-fvisibility=hidden -fpic -g -O2
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time
-D_FORTIFY_SOURCE=2 -c branch.c -o branch.o
gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS
-fvisibility=hidden -fpic -g -O2
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time
-D_FORTIFY_SOURCE=2 -c clone.c -o clone.o
gcc -I"/usr/share/R/include" -DNDEBUG -DR_NO_REMAP -DSTRICT_R_HEADERS
-fvisibility=hidden -fpic -g -O2
-ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong
-fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time
-D_FORTIFY_SOURCE=2 -c commit.c -o commit.o
In file included from commit.c:2:
commit.c: In function ‘R_git_commit_create’:
utils.h:28:29: error: passing argument 10 of ‘git_commit_create’ from
incompatible pointer type [-Wincompatible-pointer-types]
28 | #define no_const_workaround (git_commit **)
commit.c:162:60: note: in expansion of macro ‘no_const_workaround’
162 | msg.ptr, tree, number_parents, no_const_workaround
parents), "git_commit_create");
|
^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/git2/repository.h:14,
from /usr/include/git2/annotated_commit.h:11,
from /usr/include/git2.h:11,
from utils.h:1:
/usr/include/git2/commit.h:369:27: note: expected ‘const git_commit **’ but
argument is of type ‘git_commit **’
369 | const git_commit *parents[]);
| ~~~~~~~~~~~~~~~~~~^~~~~~~~~
make[1]: *** [/usr/lib/R/etc/Makeconf:195: commit.o] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
ERROR: compilation failed for package ‘gert’
* removing ‘/<<PKGBUILDDIR>>/debian/r-cran-gert/usr/lib/R/site-library/gert’
dh_auto_install: error: R CMD INSTALL -l
/<<BUILDDIR>>/r-cran-gert-2.1.2\+dfsg/debian/r-cran-gert/usr/lib/R/site-library --clean .
"--built-timestamp='Wed, 25 Sep 2024 08:26:53 +0900'" returned exit code 1
make: *** [debian/rules:4: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202410/
About the archive rebuild: The build was made on virtual machines from AWS,
using sbuild and a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Version: 2.1.4+dfsg-1
Was fixed in the recent upload, but not notated in the changelog
OpenPGP_signature.asc
Description: OpenPGP digital signature
--- End Message ---
