Your message dated Wed, 20 Dec 2023 19:23:40 +0100
with message-id <zymxlivbbvzsl...@laboissiere.net>
and subject line Re: Request for action on Bug#1057589, Bug#1057590, and
Bug#1058281
has caused the Debian Bug report #1057589,
regarding octave-ncarray: FTBFS: fatal: caught signal Segmentation fault --
stopping myself...
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
1057589: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1057589
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:octave-ncarray
Version: 1.0.5-3
Severity: serious
Tags: ftbfs
Dear maintainer:
During a rebuild of all packages in unstable, your package failed to build:
--------------------------------------------------------------------------------
[...]
debian/rules binary
dh binary --buildsystem=octave
dh_update_autotools_config -O--buildsystem=octave
dh_autoreconf -O--buildsystem=octave
dh_octave_version -O--buildsystem=octave
Checking the Octave version... ok
dh_auto_configure -O--buildsystem=octave
dh_auto_build -O--buildsystem=octave
dh_auto_test -O--buildsystem=octave
create-stamp debian/debhelper-build-stamp
dh_testroot -O--buildsystem=octave
dh_prep -O--buildsystem=octave
dh_auto_install --destdir=debian/octave-ncarray/ -O--buildsystem=octave
octave --no-gui --no-history --silent --no-init-file --no-window-system
/usr/share/dh-octave/install-pkg.m
/<<PKGBUILDDIR>>/debian/octave-ncarray/usr/share/octave/packages
/<<PKGBUILDDIR>>/debian/octave-ncarray/usr/lib/x86_64-linux-gnu/octave/packages
For information about changes from previous versions of the ncarray package,
run 'news ncarray'.
dh_octave_check -O--buildsystem=octave
Checking package...
Checking m files ...
warning: function /usr/share/octave/packages/statistics-1.6.0/shadow9/std.m
shadows a core library function
warning: called from
/usr/share/octave/packages/statistics-1.6.0/PKG_ADD at line 13 column 3
load_packages_and_dependencies at line 56 column 5
load_packages at line 53 column 3
pkg at line 639 column 7
/tmp/tmp.DHPTjFH6go at line 9 column 9
warning: function /usr/share/octave/packages/statistics-1.6.0/shadow9/var.m
shadows a core library function
warning: called from
/usr/share/octave/packages/statistics-1.6.0/PKG_ADD at line 13 column 3
load_packages_and_dependencies at line 56 column 5
load_packages at line 53 column 3
pkg at line 639 column 7
/tmp/tmp.DHPTjFH6go at line 9 column 9
warning: function /usr/share/octave/packages/statistics-1.6.0/shadow9/mean.m
shadows a core library function
warning: called from
/usr/share/octave/packages/statistics-1.6.0/PKG_ADD at line 13 column 3
load_packages_and_dependencies at line 56 column 5
load_packages at line 53 column 3
pkg at line 639 column 7
/tmp/tmp.DHPTjFH6go at line 9 column 9
warning: function /usr/share/octave/packages/statistics-1.6.0/shadow9/median.m
shadows a core library function
warning: called from
/usr/share/octave/packages/statistics-1.6.0/PKG_ADD at line 13 column 3
load_packages_and_dependencies at line 56 column 5
load_packages at line 53 column 3
pkg at line 639 column 7
/tmp/tmp.DHPTjFH6go at line 9 column 9
warning: function /usr/share/octave/packages/statistics-1.6.0/shadow9/mad.m
shadows a core library function
warning: called from
/usr/share/octave/packages/statistics-1.6.0/PKG_ADD at line 13 column 3
load_packages_and_dependencies at line 56 column 5
load_packages at line 53 column 3
pkg at line 639 column 7
/tmp/tmp.DHPTjFH6go at line 9 column 9
[inst/test_ncarray_nan.m]
/<<PKGBUILDDIR>>/inst/test_ncarray_nan.m
***** test
test_ncarray_nan ()
warning: test: file /<<PKGBUILDDIR>>/inst/test_ncarray_nan.m leaked global
variables: CACHED_DECOMPRESS_DIR CACHED_DECOMPRESS_LOG_FID CACHED_DECOMPRESS_MAX_SIZE
1 test, 1 passed, 0 known failure, 0 skipped
[inst/test_ncarray.m]
/<<PKGBUILDDIR>>/inst/test_ncarray.m
***** test
test_ncarray()
creating directory /tmp/oct-n6O7Cg for temporary files.
All tests passed.
1 test, 1 passed, 0 known failure, 0 skipped
Checking C++ files ...
fatal: caught signal Segmentation fault -- stopping myself...
Segmentation fault
make: *** [debian/rules:5: binary] Error 139
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--------------------------------------------------------------------------------
The above is just how the build ends and not necessarily the most relevant part.
If required, the full build log is available here:
https://people.debian.org/~sanvila/build-logs/202312/
About the archive rebuild: The build was made using virtual machines
from AWS, with enough memory, enough disk, and either one or two
CPUs, using a reduced chroot with only build-essential packages.
If you could not reproduce the bug please contact me privately, as I
am willing to provide ssh access to a virtual machine where the bug is
fully reproducible.
If this is really a bug in one of the build-depends, please use
reassign and affects, so that this is still visible in the BTS web
page for this package.
Thanks.
--- End Message ---
--- Begin Message ---
Control: reassign 1057589 src:netcdf
Control: reassign 1057590 src:netcdf
Control: reassign 1058281 src:netcdf
Control: affects 1057589 octave-netcdf octave-ncarray
Control: affects 1057590 octave-netcdf octave-ncarray
Control: affects 1058281 octave-netcdf octave-ncarray
Control: found 1057589 4.9.2-2
Control: found 1057590 4.9.2-2
Control: found 1058281 4.9.2-2
Control: fixed 1057589 4.9.2-3
Control: fixed 1057590 4.9.2-3
Control: fixed 1058281 4.9.2-3
* Santiago Vila <sanv...@debian.org> [2023-12-20 12:42]:
El 20/12/23 a las 7:02, Rafael Laboissière escribió:
Hi Santiago and Lucas,
You have filed bug reports against octave-netcdf (Bug#1057590) and
octave-ncarray (Bug#1057589 and Bug#1058281). These packages FTBFS due to an
issue in the netcdf package (Bug#1058281), which has been fixed thanks to the
recent upload of version 4.9.2-3.
Would it be possible to check the build of octave-netcdf and octave-ncarray on
your systems, such that we can close the bug reports?
Hello. I confirm that both octave-netcdf and octave-ncarray build ok
in both trixie and sid, where they previously failed.
Thanks for the check, Santiago.
I'm not sure at this point if the bugs should be reassigned to netcdf
before being closed (and another affects added), so I leave that to
you.
I am hereby trying to do this. Hope I got the Control lines right.
Best,
Rafael
Thanks.
--- End Message ---
