Source: picard-tools Version: 2.27.5+dfsg-2 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: lu...@debian.org Usertags: ftbfs-20221220 ftbfs-bookworm
Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > make[1]: Entering directory '/<<PKGBUILDDIR>>' > blhc: ignore-line-regexp: .*gradle.*ScriptTransformer.* > dh_auto_build -- jar javadoc > mkdir -p .gradle/init.d > cp /usr/share/gradle-debian-helper/init.gradle .gradle/init.d/ > gradle --info --console plain --offline --stacktrace --no-daemon > --refresh-dependencies --gradle-user-home .gradle -Duser.home=. > -Duser.name=debian -Ddebian.package=picard-tools -Dfile.encoding=UTF-8 > --parallel --max-workers=8 jar javadoc > OpenJDK 64-Bit Server VM warning: Ignoring option --illegal-access=permit; > support was removed in 17.0 > Initialized native services in: /<<PKGBUILDDIR>>/.gradle/native > To honour the JVM settings for this build a new JVM will be forked. Please > consider using the daemon: > https://docs.gradle.org/4.4.1/userguide/gradle_daemon.html. > Starting process 'Gradle build daemon'. Working directory: > /<<PKGBUILDDIR>>/.gradle/daemon/4.4.1 Command: > /usr/lib/jvm/java-17-openjdk-amd64/bin/java > -Xbootclasspath/a:/usr/share/java/gradle-helper-hook.jar:/usr/share/java/maven-repo-helper.jar > --add-opens java.base/java.lang=ALL-UNNAMED -Dfile.encoding=UTF-8 > -Duser.country -Duser.language=en -Duser.variant -cp > /usr/share/gradle/lib/gradle-launcher-4.4.1.jar > org.gradle.launcher.daemon.bootstrap.GradleDaemon 4.4.1 > Successfully started process 'Gradle build daemon' > An attempt to start the daemon took 1.045 secs. > The client will now receive all logging from the daemon (pid: 1047890). The > daemon log file: /<<PKGBUILDDIR>>/.gradle/daemon/4.4.1/daemon-1047890.out.log > Daemon will be stopped at the end of the build stopping after processing > Closing daemon's stdin at end of input. > The daemon will no longer process any standard input. > Using 8 worker leases. > Creating new cache for fileHashes, path > /<<PKGBUILDDIR>>/.gradle/caches/4.4.1/fileHashes/fileHashes.bin, access > org.gradle.cache.internal.DefaultCacheAccess@2330d380 > Creating new cache for resourceHashesCache, path > /<<PKGBUILDDIR>>/.gradle/caches/4.4.1/fileHashes/resourceHashesCache.bin, > access org.gradle.cache.internal.DefaultCacheAccess@2330d380 > Creating new cache for fileHashes, path > /<<PKGBUILDDIR>>/.gradle/4.4.1/fileHashes/fileHashes.bin, access > org.gradle.cache.internal.DefaultCacheAccess@688dee70 > Starting Build > Compiling initialization script '/<<PKGBUILDDIR>>/.gradle/init.d/init.gradle' > using SubsetScriptTransformer. > Creating new cache for metadata-1.1/results, path > /<<PKGBUILDDIR>>/.gradle/caches/transforms-1/metadata-1.1/results.bin, access > org.gradle.cache.internal.DefaultCacheAccess@19a51d7b > Compiling initialization script '/<<PKGBUILDDIR>>/.gradle/init.d/init.gradle' > using BuildScriptTransformer. > Compiling settings file '/<<PKGBUILDDIR>>/settings.gradle' using > SubsetScriptTransformer. > Compiling settings file '/<<PKGBUILDDIR>>/settings.gradle' using > BuildScriptTransformer. > Settings evaluated using settings file '/<<PKGBUILDDIR>>/settings.gradle'. > Projects loaded. Root project using build file > '/<<PKGBUILDDIR>>/build.gradle'. > Included projects: [root project 'picard'] > Keep-alive timer started > Adding Debian repository to project 'picard' > Parallel execution is an incubating feature. > Evaluating root project 'picard' using build file > '/<<PKGBUILDDIR>>/build.gradle'. > Compiling build file '/<<PKGBUILDDIR>>/build.gradle' using > SubsetScriptTransformer. > Compiling build file '/<<PKGBUILDDIR>>/build.gradle' using > BuildScriptTransformer. > Starting process 'command 'dpkg-parsechangelog''. Working directory: > /<<PKGBUILDDIR>> Command: dpkg-parsechangelog -S Version > Successfully started process 'command 'dpkg-parsechangelog'' > build for version:2.27.5 > Creating new cache for metadata-2.36/module-metadata, path > /<<PKGBUILDDIR>>/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, > access org.gradle.cache.internal.DefaultCacheAccess@2d7523ee > Loading the Maven rules... > Replacing com.intel.gkl:gkl:jar:0.8.8 -> com.intel.gkl:gkl:jar:debian > Replacing com.google.guava:guava:jar:15.0 -> > com.google.guava:guava:jar:debian > Passing through com.google.guava:guava-parent:jar:debian > Passing through commons-io:commons-io:jar:debian > Passing through org.apache.commons:commons-parent:jar:debian > Passing through org.apache:apache:jar:debian > Replacing org.apache.commons:commons-math3:jar:3.5 -> > org.apache.commons:commons-math3:jar:debian > Replacing org.apache.commons:commons-collections4:jar:4.3 -> > org.apache.commons:commons-collections4:jar:debian > Replacing commons-lang:commons-lang:jar:2.6 -> > commons-lang:commons-lang:jar:debian > Replacing com.github.samtools:htsjdk:jar:3.0.1 -> > com.github.samtools:htsjdk:jar:debian > Replacing org.broadinstitute:barclay:jar:4.0.2 -> > org.broadinstitute:barclay:jar:debian > Replacing org.apache.logging.log4j:log4j-api:jar:2.17.1 -> > org.apache.logging.log4j:log4j-api:jar:debian > Passing through org.apache.logging.log4j:log4j:jar:debian > Passing through org.apache.logging.log4j:log4j-bom:jar:debian > Passing through org.junit:junit-bom:jar:debian > Replacing org.apache.logging.log4j:log4j-core:jar:2.17.1 -> > org.apache.logging.log4j:log4j-core:jar:debian > Passing through org.apache.logging.log4j:log4j:jar:debian > Passing through org.apache.commons:commons-lang3:jar:debian > Passing through org.broadinstitute:gatk-native-bindings:jar:debian > Passing through org.jsr-305:jsr305:jar:0.x > Passing through com.google.errorprone:error_prone_annotations:jar:debian > Passing through com.google.errorprone:error_prone_parent:jar:debian > Passing through org.apache.commons:commons-jexl:jar:debian > Passing through commons-logging:commons-logging:jar:debian > Passing through org.xerial.snappy:snappy-java:jar:debian > Passing through org.apache.commons:commons-compress:jar:debian > Passing through org.tukaani:xz:jar:debian > Passing through gov.nih.nlm.ncbi:ngs-java:jar:debian > Passing through org.sharegov:mjson:jar:debian > Passing through net.sf.jopt-simple:jopt-simple:jar:debian > Passing through com.google.code.gson:gson:jar:debian > Passing through com.google.code.gson:gson-parent:jar:debian > Passing through org.freemarker:freemarker:jar:debian > Adding Maven pom generation to project 'picard' > Linking the generated javadoc to the system JDK API documentation > > FAILURE: Build failed with an exception. > > * Where: > Build file '/<<PKGBUILDDIR>>/build.gradle' line: 197 > > * What went wrong: > A problem occurred evaluating root project 'picard'. > > Could not resolve all files for configuration ':compileClasspath'. > > Could not resolve org.apache.logging.log4j:log4j-api:2.17.1. > Required by: > project : > > Could not resolve org.apache.logging.log4j:log4j-api:2.17.1. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.pom > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j/debian/log4j-debian.pom > > Could not resolve org.junit:junit-bom:debian. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-api:2.17.1 > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-api:2.17.1 > available for offline mode. > > Could not resolve org.apache.logging.log4j:log4j-core:2.17.1. > Required by: > project : > > Could not resolve org.apache.logging.log4j:log4j-core:2.17.1. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.pom > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j/debian/log4j-debian.pom > > Could not resolve org.junit:junit-bom:debian. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-core:2.17.1 > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-core:2.17.1 > available for offline mode. > > Could not resolve org.apache.logging.log4j:log4j-api:2.17.1. > Required by: > project : > com.intel.gkl:gkl:debian > project : > org.broadinstitute:barclay:debian > > Could not resolve org.apache.logging.log4j:log4j-api:2.17.1. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.pom > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j/debian/log4j-debian.pom > > Could not resolve org.junit:junit-bom:debian. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-api:2.17.1 > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-api:2.17.1 > available for offline mode. > > Could not resolve org.apache.logging.log4j:log4j-core:2.17.1. > Required by: > project : > com.intel.gkl:gkl:debian > > Could not resolve org.apache.logging.log4j:log4j-core:2.17.1. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j-core/debian/log4j-core-debian.pom > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not resolve org.apache.logging.log4j:log4j:debian. > > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j/debian/log4j-debian.pom > > Could not resolve org.junit:junit-bom:debian. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.junit:junit-bom:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j:debian > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-core:2.17.1 > available for offline mode. > > No cached version of org.apache.logging.log4j:log4j-core:2.17.1 > available for offline mode. > > * Try: > Run with --debug option to get more log output. Run with --scan to get full > insights. > > * Exception is: > org.gradle.api.GradleScriptException: A problem occurred evaluating root > project 'picard'. > at > org.gradle.groovy.scripts.internal.DefaultScriptRunnerFactory$ScriptRunnerImpl.run(DefaultScriptRunnerFactory.java:92) > at > org.gradle.configuration.DefaultScriptPluginFactory$ScriptPluginImpl$2.run(DefaultScriptPluginFactory.java:199) > at > org.gradle.configuration.ProjectScriptTarget.addConfiguration(ProjectScriptTarget.java:77) > at > org.gradle.configuration.DefaultScriptPluginFactory$ScriptPluginImpl.apply(DefaultScriptPluginFactory.java:204) > at > org.gradle.configuration.BuildOperationScriptPlugin$1.run(BuildOperationScriptPlugin.java:61) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) > at > org.gradle.configuration.BuildOperationScriptPlugin.apply(BuildOperationScriptPlugin.java:58) > at > org.gradle.configuration.project.BuildScriptProcessor.execute(BuildScriptProcessor.java:41) > at > org.gradle.configuration.project.BuildScriptProcessor.execute(BuildScriptProcessor.java:26) > at > org.gradle.configuration.project.ConfigureActionsProjectEvaluator.evaluate(ConfigureActionsProjectEvaluator.java:34) > at > org.gradle.configuration.project.LifecycleProjectEvaluator.doConfigure(LifecycleProjectEvaluator.java:64) > at > org.gradle.configuration.project.LifecycleProjectEvaluator.access$100(LifecycleProjectEvaluator.java:34) > at > org.gradle.configuration.project.LifecycleProjectEvaluator$ConfigureProject.run(LifecycleProjectEvaluator.java:110) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) > at > org.gradle.configuration.project.LifecycleProjectEvaluator.evaluate(LifecycleProjectEvaluator.java:50) > at > org.gradle.api.internal.project.DefaultProject.evaluate(DefaultProject.java:666) > at > org.gradle.api.internal.project.DefaultProject.evaluate(DefaultProject.java:135) > at > org.gradle.execution.TaskPathProjectEvaluator.configure(TaskPathProjectEvaluator.java:35) > at > org.gradle.execution.TaskPathProjectEvaluator.configureHierarchy(TaskPathProjectEvaluator.java:60) > at > org.gradle.configuration.DefaultBuildConfigurer.configure(DefaultBuildConfigurer.java:38) > at > org.gradle.initialization.DefaultGradleLauncher$ConfigureBuild.run(DefaultGradleLauncher.java:249) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) > at > org.gradle.initialization.DefaultGradleLauncher.configureBuild(DefaultGradleLauncher.java:167) > at > org.gradle.initialization.DefaultGradleLauncher.doBuildStages(DefaultGradleLauncher.java:126) > at > org.gradle.initialization.DefaultGradleLauncher.executeTasks(DefaultGradleLauncher.java:109) > at > org.gradle.internal.invocation.GradleBuildController$1.call(GradleBuildController.java:78) > at > org.gradle.internal.invocation.GradleBuildController$1.call(GradleBuildController.java:75) > at > org.gradle.internal.work.DefaultWorkerLeaseService.withLocks(DefaultWorkerLeaseService.java:152) > at > org.gradle.internal.invocation.GradleBuildController.doBuild(GradleBuildController.java:100) > at > org.gradle.internal.invocation.GradleBuildController.run(GradleBuildController.java:75) > at > org.gradle.tooling.internal.provider.ExecuteBuildActionRunner.run(ExecuteBuildActionRunner.java:28) > at > org.gradle.launcher.exec.ChainingBuildActionRunner.run(ChainingBuildActionRunner.java:35) > at > org.gradle.tooling.internal.provider.ValidatingBuildActionRunner.run(ValidatingBuildActionRunner.java:32) > at > org.gradle.launcher.exec.RunAsBuildOperationBuildActionRunner$1.run(RunAsBuildOperationBuildActionRunner.java:43) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) > at > org.gradle.launcher.exec.RunAsBuildOperationBuildActionRunner.run(RunAsBuildOperationBuildActionRunner.java:40) > at > org.gradle.tooling.internal.provider.SubscribableBuildActionRunner.run(SubscribableBuildActionRunner.java:51) > at > org.gradle.launcher.exec.InProcessBuildActionExecuter.execute(InProcessBuildActionExecuter.java:47) > at > org.gradle.launcher.exec.InProcessBuildActionExecuter.execute(InProcessBuildActionExecuter.java:30) > at > org.gradle.launcher.exec.BuildTreeScopeBuildActionExecuter.execute(BuildTreeScopeBuildActionExecuter.java:39) > at > org.gradle.launcher.exec.BuildTreeScopeBuildActionExecuter.execute(BuildTreeScopeBuildActionExecuter.java:25) > at > org.gradle.tooling.internal.provider.ContinuousBuildActionExecuter.execute(ContinuousBuildActionExecuter.java:80) > at > org.gradle.tooling.internal.provider.ContinuousBuildActionExecuter.execute(ContinuousBuildActionExecuter.java:53) > at > org.gradle.tooling.internal.provider.ServicesSetupBuildActionExecuter.execute(ServicesSetupBuildActionExecuter.java:57) > at > org.gradle.tooling.internal.provider.ServicesSetupBuildActionExecuter.execute(ServicesSetupBuildActionExecuter.java:32) > at > org.gradle.tooling.internal.provider.GradleThreadBuildActionExecuter.execute(GradleThreadBuildActionExecuter.java:36) > at > org.gradle.tooling.internal.provider.GradleThreadBuildActionExecuter.execute(GradleThreadBuildActionExecuter.java:25) > at > org.gradle.tooling.internal.provider.ParallelismConfigurationBuildActionExecuter.execute(ParallelismConfigurationBuildActionExecuter.java:43) > at > org.gradle.tooling.internal.provider.ParallelismConfigurationBuildActionExecuter.execute(ParallelismConfigurationBuildActionExecuter.java:29) > at > org.gradle.tooling.internal.provider.StartParamsValidatingActionExecuter.execute(StartParamsValidatingActionExecuter.java:69) > at > org.gradle.tooling.internal.provider.StartParamsValidatingActionExecuter.execute(StartParamsValidatingActionExecuter.java:30) > at > org.gradle.tooling.internal.provider.SessionFailureReportingActionExecuter.execute(SessionFailureReportingActionExecuter.java:59) > at > org.gradle.tooling.internal.provider.SessionFailureReportingActionExecuter.execute(SessionFailureReportingActionExecuter.java:44) > at > org.gradle.tooling.internal.provider.SetupLoggingActionExecuter.execute(SetupLoggingActionExecuter.java:45) > at > org.gradle.tooling.internal.provider.SetupLoggingActionExecuter.execute(SetupLoggingActionExecuter.java:30) > at > org.gradle.launcher.daemon.server.exec.ExecuteBuild.doBuild(ExecuteBuild.java:67) > at > org.gradle.launcher.daemon.server.exec.BuildCommandOnly.execute(BuildCommandOnly.java:36) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.WatchForDisconnection.execute(WatchForDisconnection.java:37) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.ResetDeprecationLogger.execute(ResetDeprecationLogger.java:26) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.RequestStopIfSingleUsedDaemon.execute(RequestStopIfSingleUsedDaemon.java:34) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.ForwardClientInput$2.call(ForwardClientInput.java:74) > at > org.gradle.launcher.daemon.server.exec.ForwardClientInput$2.call(ForwardClientInput.java:72) > at org.gradle.util.Swapper.swap(Swapper.java:38) > at > org.gradle.launcher.daemon.server.exec.ForwardClientInput.execute(ForwardClientInput.java:72) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.LogAndCheckHealth.execute(LogAndCheckHealth.java:50) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.LogToClient.doBuild(LogToClient.java:62) > at > org.gradle.launcher.daemon.server.exec.BuildCommandOnly.execute(BuildCommandOnly.java:36) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.EstablishBuildEnvironment.doBuild(EstablishBuildEnvironment.java:82) > at > org.gradle.launcher.daemon.server.exec.BuildCommandOnly.execute(BuildCommandOnly.java:36) > at > org.gradle.launcher.daemon.server.api.DaemonCommandExecution.proceed(DaemonCommandExecution.java:122) > at > org.gradle.launcher.daemon.server.exec.StartBuildOrRespondWithBusy$1.run(StartBuildOrRespondWithBusy.java:50) > at > org.gradle.launcher.daemon.server.DaemonStateCoordinator$1.run(DaemonStateCoordinator.java:295) > at > org.gradle.internal.concurrent.ExecutorPolicy$CatchAndRecordFailures.onExecute(ExecutorPolicy.java:63) > at > org.gradle.internal.concurrent.ManagedExecutorImpl$1.run(ManagedExecutorImpl.java:46) > at > org.gradle.internal.concurrent.ThreadFactoryImpl$ManagedThreadRunnable.run(ThreadFactoryImpl.java:55) > Caused by: > org.gradle.api.internal.artifacts.ivyservice.DefaultLenientConfiguration$ArtifactResolveException: > Could not resolve all files for configuration ':compileClasspath'. > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.rethrowFailure(DefaultConfiguration.java:918) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.access$1600(DefaultConfiguration.java:116) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$ConfigurationFileCollection.getFiles(DefaultConfiguration.java:892) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.getFiles(DefaultConfiguration.java:404) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration_Decorated.getFiles(Unknown > Source) > at > org.gradle.api.internal.file.CompositeFileCollection.getFiles(CompositeFileCollection.java:56) > at > org.gradle.api.internal.file.AbstractFileCollection.asType(AbstractFileCollection.java:163) > at org.gradle.api.file.FileCollection$asType$0.call(Unknown Source) > at > build_2kld2eur79b1jh682sh6ei9fd$_run_closure9.doCall(/<<PKGBUILDDIR>>/build.gradle:197) > at > java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) > at > java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) > at > java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) > at > org.gradle.api.internal.ClosureBackedAction.execute(ClosureBackedAction.java:71) > at org.gradle.util.ConfigureUtil.configureTarget(ConfigureUtil.java:160) > at org.gradle.util.ConfigureUtil.configureSelf(ConfigureUtil.java:136) > at org.gradle.api.internal.AbstractTask.configure(AbstractTask.java:634) > at > org.gradle.api.internal.project.DefaultProject.task(DefaultProject.java:1208) > at > java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method) > at > java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:77) > at > java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) > at > org.gradle.internal.metaobject.BeanDynamicObject$MetaClassAdapter.invokeMethod(BeanDynamicObject.java:479) > at > org.gradle.internal.metaobject.BeanDynamicObject.tryInvokeMethod(BeanDynamicObject.java:191) > at > org.gradle.internal.metaobject.CompositeDynamicObject.tryInvokeMethod(CompositeDynamicObject.java:98) > at > org.gradle.internal.metaobject.MixInClosurePropertiesAsMethodsDynamicObject.tryInvokeMethod(MixInClosurePropertiesAsMethodsDynamicObject.java:30) > at > org.gradle.groovy.scripts.BasicScript$ScriptDynamicObject.tryInvokeMethod(BasicScript.java:134) > at > org.gradle.internal.metaobject.AbstractDynamicObject.invokeMethod(AbstractDynamicObject.java:160) > at > org.gradle.groovy.scripts.BasicScript.invokeMethod(BasicScript.java:83) > at > build_2kld2eur79b1jh682sh6ei9fd.run(/<<PKGBUILDDIR>>/build.gradle:175) > at > org.gradle.groovy.scripts.internal.DefaultScriptRunnerFactory$ScriptRunnerImpl.run(DefaultScriptRunnerFactory.java:90) > ... 93 more > Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: Could > not resolve org.apache.logging.log4j:log4j-api:2.17.1. > Required by: > project : > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:103) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolve(RepositoryChainComponentMetaDataResolver.java:63) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.ComponentResolversChain$ComponentMetaDataResolverChain.resolve(ComponentResolversChain.java:93) > at > org.gradle.api.internal.artifacts.ivyservice.clientmodule.ClientModuleResolver.resolve(ClientModuleResolver.java:48) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.ComponentState.resolve(ComponentState.java:157) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.ComponentState.getMetaData(ComponentState.java:168) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.EdgeState.calculateTargetConfigurations(EdgeState.java:134) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.EdgeState.attachToTargetConfigurations(EdgeState.java:105) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.attachToTargetRevisionsSerially(DependencyGraphBuilder.java:239) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.resolveEdges(DependencyGraphBuilder.java:229) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.traverseGraph(DependencyGraphBuilder.java:143) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.graph.builder.DependencyGraphBuilder.resolve(DependencyGraphBuilder.java:109) > at > org.gradle.api.internal.artifacts.ivyservice.resolveengine.DefaultArtifactDependencyResolver.resolve(DefaultArtifactDependencyResolver.java:90) > at > org.gradle.api.internal.artifacts.ivyservice.DefaultConfigurationResolver.resolveGraph(DefaultConfigurationResolver.java:146) > at > org.gradle.api.internal.artifacts.ivyservice.ShortCircuitEmptyConfigurationResolver.resolveGraph(ShortCircuitEmptyConfigurationResolver.java:73) > at > org.gradle.api.internal.artifacts.ivyservice.ErrorHandlingConfigurationResolver.resolveGraph(ErrorHandlingConfigurationResolver.java:66) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$4.run(DefaultConfiguration.java:483) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:336) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor$RunnableBuildOperationWorker.execute(DefaultBuildOperationExecutor.java:328) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.execute(DefaultBuildOperationExecutor.java:199) > at > org.gradle.internal.progress.DefaultBuildOperationExecutor.run(DefaultBuildOperationExecutor.java:110) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.resolveGraphIfRequired(DefaultConfiguration.java:474) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.resolveToStateOrLater(DefaultConfiguration.java:459) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.access$1700(DefaultConfiguration.java:116) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$ConfigurationFileCollection.getSelectedArtifacts(DefaultConfiguration.java:901) > at > org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$ConfigurationFileCollection.getFiles(DefaultConfiguration.java:889) > ... 119 more > Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: Could > not resolve org.apache.logging.log4j:log4j-api:2.17.1. > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ErrorHandlingModuleComponentRepository$ErrorHandlingModuleComponentRepositoryAccess.resolveComponentMetaData(ErrorHandlingModuleComponentRepository.java:129) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.process(ComponentMetaDataResolveState.java:66) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.resolve(ComponentMetaDataResolveState.java:45) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:138) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:119) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:92) > ... 144 more > Caused by: > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.MetaDataParseException: > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j-api/debian/log4j-api-debian.pom > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.AbstractModuleDescriptorParser.parseDescriptor(AbstractModuleDescriptorParser.java:54) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.AbstractModuleDescriptorParser.parseMetaData(AbstractModuleDescriptorParser.java:43) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromResource(MavenResolver.java:299) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromResource(MavenResolver.java:65) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolver.parseMetaDataFromArtifact(ExternalResourceResolver.java:222) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromArtifact(MavenResolver.java:200) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromArtifact(MavenResolver.java:65) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolver.resolveStaticDependency(ExternalResourceResolver.java:193) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.doResolveComponentMetaData(MavenResolver.java:175) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolver$RemoteRepositoryAccess.resolveComponentMetaData(ExternalResourceResolver.java:467) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.LocalModuleComponentRepository$LocalAccess.resolveComponentMetaData(LocalModuleComponentRepository.java:70) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.BaseModuleComponentRepositoryAccess.resolveComponentMetaData(BaseModuleComponentRepositoryAccess.java:50) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.memcache.InMemoryCachedModuleComponentRepository$CachedAccess.resolveComponentMetaData(InMemoryCachedModuleComponentRepository.java:95) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ErrorHandlingModuleComponentRepository$ErrorHandlingModuleComponentRepositoryAccess.resolveComponentMetaData(ErrorHandlingModuleComponentRepository.java:126) > ... 149 more > Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: Could > not resolve org.apache.logging.log4j:log4j:debian. > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:103) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolve(RepositoryChainComponentMetaDataResolver.java:63) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ResolveIvyFactory$ParentModuleLookupResolver.resolve(ResolveIvyFactory.java:165) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolverDescriptorParseContext.resolveMetaDataArtifactFile(ExternalResourceResolverDescriptorParseContext.java:73) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolverDescriptorParseContext.getMetaDataArtifact(ExternalResourceResolverDescriptorParseContext.java:59) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolverDescriptorParseContext.getMetaDataArtifact(ExternalResourceResolverDescriptorParseContext.java:67) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.parsePomForSelector(GradlePomModuleDescriptorParser.java:217) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.doParsePom(GradlePomModuleDescriptorParser.java:115) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.doParseDescriptor(GradlePomModuleDescriptorParser.java:90) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.doParseDescriptor(GradlePomModuleDescriptorParser.java:59) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.AbstractModuleDescriptorParser.parseDescriptor(AbstractModuleDescriptorParser.java:48) > ... 162 more > Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: Could > not resolve org.apache.logging.log4j:log4j:debian. > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ErrorHandlingModuleComponentRepository$ErrorHandlingModuleComponentRepositoryAccess.resolveComponentMetaData(ErrorHandlingModuleComponentRepository.java:129) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.process(ComponentMetaDataResolveState.java:66) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.resolve(ComponentMetaDataResolveState.java:45) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:138) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:119) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:92) > ... 172 more > Caused by: > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.MetaDataParseException: > Could not parse POM > /usr/share/maven-repo/org/apache/logging/log4j/log4j/debian/log4j-debian.pom > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.AbstractModuleDescriptorParser.parseDescriptor(AbstractModuleDescriptorParser.java:54) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.AbstractModuleDescriptorParser.parseMetaData(AbstractModuleDescriptorParser.java:43) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromResource(MavenResolver.java:299) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromResource(MavenResolver.java:65) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolver.parseMetaDataFromArtifact(ExternalResourceResolver.java:222) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromArtifact(MavenResolver.java:200) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.parseMetaDataFromArtifact(MavenResolver.java:65) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolver.resolveStaticDependency(ExternalResourceResolver.java:193) > at > org.gradle.api.internal.artifacts.repositories.resolver.MavenResolver.doResolveComponentMetaData(MavenResolver.java:175) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolver$RemoteRepositoryAccess.resolveComponentMetaData(ExternalResourceResolver.java:467) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.LocalModuleComponentRepository$LocalAccess.resolveComponentMetaData(LocalModuleComponentRepository.java:70) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.BaseModuleComponentRepositoryAccess.resolveComponentMetaData(BaseModuleComponentRepositoryAccess.java:50) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.memcache.InMemoryCachedModuleComponentRepository$CachedAccess.resolveComponentMetaData(InMemoryCachedModuleComponentRepository.java:95) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ErrorHandlingModuleComponentRepository$ErrorHandlingModuleComponentRepositoryAccess.resolveComponentMetaData(ErrorHandlingModuleComponentRepository.java:126) > ... 177 more > Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: Could > not resolve org.junit:junit-bom:debian. > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:103) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolve(RepositoryChainComponentMetaDataResolver.java:63) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ResolveIvyFactory$ParentModuleLookupResolver.resolve(ResolveIvyFactory.java:165) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolverDescriptorParseContext.resolveMetaDataArtifactFile(ExternalResourceResolverDescriptorParseContext.java:73) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolverDescriptorParseContext.getMetaDataArtifact(ExternalResourceResolverDescriptorParseContext.java:59) > at > org.gradle.api.internal.artifacts.repositories.resolver.ExternalResourceResolverDescriptorParseContext.getMetaDataArtifact(ExternalResourceResolverDescriptorParseContext.java:67) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.parsePomForSelector(GradlePomModuleDescriptorParser.java:217) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.parseImportedDependencyMgts(GradlePomModuleDescriptorParser.java:191) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.overrideDependencyMgtsWithImported(GradlePomModuleDescriptorParser.java:169) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.doParsePom(GradlePomModuleDescriptorParser.java:143) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.doParseDescriptor(GradlePomModuleDescriptorParser.java:90) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.GradlePomModuleDescriptorParser.doParseDescriptor(GradlePomModuleDescriptorParser.java:59) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.parser.AbstractModuleDescriptorParser.parseDescriptor(AbstractModuleDescriptorParser.java:48) > ... 190 more > Caused by: org.gradle.internal.resolve.ModuleVersionResolveException: No > cached version of org.junit:junit-bom:debian available for offline mode. > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.StartParameterResolutionOverride$FailedRemoteAccess.resolveComponentMetaData(StartParameterResolutionOverride.java:129) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.CachingModuleComponentRepository$ResolveAndCacheRepositoryAccess.resolveComponentMetaData(CachingModuleComponentRepository.java:363) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.BaseModuleComponentRepositoryAccess.resolveComponentMetaData(BaseModuleComponentRepositoryAccess.java:50) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.memcache.InMemoryCachedModuleComponentRepository$CachedAccess.resolveComponentMetaData(InMemoryCachedModuleComponentRepository.java:95) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ErrorHandlingModuleComponentRepository$ErrorHandlingModuleComponentRepositoryAccess.resolveComponentMetaData(ErrorHandlingModuleComponentRepository.java:126) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.process(ComponentMetaDataResolveState.java:66) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.resolve(ComponentMetaDataResolveState.java:58) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:138) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:119) > at > org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:92) > ... 202 more > > > * Get more help at https://help.gradle.org > > BUILD FAILED in 5s > dh_auto_build: error: gradle --info --console plain --offline --stacktrace > --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. > -Duser.name=debian -Ddebian.package=picard-tools -Dfile.encoding=UTF-8 > --parallel --max-workers=8 jar javadoc returned exit code 1 > make[1]: *** [debian/rules:15: override_dh_auto_build] Error 25 The full build log is available from: http://qa-logs.debian.net/2022/12/20/picard-tools_2.27.5+dfsg-2_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20221220;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20221220&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime.
