Your message dated Fri, 02 Dec 2022 21:36:31 +0000
with message-id <e1p1dhv-00b4v1...@fasolo.debian.org>
and subject line Bug#984244: fixed in mpqc 2.3.1-22
has caused the Debian Bug report #984244,
regarding mpqc: ftbfs with GCC-11
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)
--
984244: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=984244
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:mpqc
Version: 2.3.1-21
Severity: normal
Tags: sid bookworm
User: debian-...@lists.debian.org
Usertags: ftbfs-gcc-11
[This bug is not targeted to the upcoming bullseye release]
Please keep this issue open in the bug tracker for the package it
was filed for. If a fix in another package is required, please
file a bug for the other package (or clone), and add a block in this
package. Please keep the issue open until the package can be built in
a follow-up test rebuild.
The package fails to build in a test rebuild on at least amd64 with
gcc-11/g++-11, but succeeds to build with gcc-10/g++-10. The
severity of this report will be raised before the bookworm release,
so nothing has to be done for the bullseye release.
The full build log can be found at:
http://people.debian.org/~doko/logs/20210228/filtered/gcc11/mpqc_2.3.1-21_unstable_gcc11.log
The last lines of the build log are at the end of this report.
To build with GCC 11, either set CC=gcc-11 CXX=g++-11 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.
apt-get -t=experimental install g++
Common build failures are new warnings resulting in build failures with
-Werror turned on, or new/dropped symbols in Debian symbols files.
For other C/C++ related build failures see the porting guide at
http://gcc.gnu.org/gcc-11/porting_to.html
GCC 11 defaults to the GNU++17 standard. If your package installs
header files in /usr/include, please don't work around C++17 issues
by choosing a lower C++ standard for the package build, but fix these
issues to build with the C++17 standard.
[...]
2 | #include <chemistry/qc/mbptr12/f77sym.h>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
compute_ikjy.cc | sed 's/^compute_ikjy.o/compute_ikjy.lo compute_ikjy.d/g' >
compute_ikjy.d
In file included from compute_ikjy.cc:44:
../../../../../src/lib/chemistry/qc/mbptr12/blas.h:2:10: fatal error:
chemistry/qc/mbptr12/f77sym.h: No such file or directory
2 | #include <chemistry/qc/mbptr12/f77sym.h>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
compute_ixjy.cc | sed 's/^compute_ixjy.o/compute_ixjy.lo compute_ixjy.d/g' >
compute_ixjy.d
In file included from compute_ixjy.cc:44:
../../../../../src/lib/chemistry/qc/mbptr12/blas.h:2:10: fatal error:
chemistry/qc/mbptr12/f77sym.h: No such file or directory
2 | #include <chemistry/qc/mbptr12/f77sym.h>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_12inds.cc | sed 's/^transform_12inds.o/transform_12inds.lo
transform_12inds.d/g' > transform_12inds.d
In file included from transform_12inds.cc:41:
../../../../../src/lib/chemistry/qc/mbptr12/blas.h:2:10: fatal error:
chemistry/qc/mbptr12/f77sym.h: No such file or directory
2 | #include <chemistry/qc/mbptr12/f77sym.h>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_13inds.cc | sed 's/^transform_13inds.o/transform_13inds.lo
transform_13inds.d/g' > transform_13inds.d
In file included from transform_13inds.cc:41:
../../../../../src/lib/chemistry/qc/mbptr12/blas.h:2:10: fatal error:
chemistry/qc/mbptr12/f77sym.h: No such file or directory
2 | #include <chemistry/qc/mbptr12/f77sym.h>
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
compilation terminated.
perl ../../../../../bin/mkf77sym.pl f77sym.in f77sym.h
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_123inds.cc | sed 's/^transform_123inds.o/transform_123inds.lo
transform_123inds.d/g' > transform_123inds.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_ikjy.cc | sed 's/^transform_ikjy.o/transform_ikjy.lo
transform_ikjy.d/g' > transform_ikjy.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_ixjy.cc | sed 's/^transform_ixjy.o/transform_ixjy.lo
transform_ixjy.d/g' > transform_ixjy.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_ijxy.cc | sed 's/^transform_ijxy.o/transform_ijxy.lo
transform_ijxy.d/g' > transform_ijxy.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_tbint.cc | sed 's/^transform_tbint.o/transform_tbint.lo
transform_tbint.d/g' > transform_tbint.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
transform_factory.cc | sed 's/^transform_factory.o/transform_factory.lo
transform_factory.d/g' > transform_factory.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
pairiter.cc | sed 's/^pairiter.o/pairiter.lo pairiter.d/g' > pairiter.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
moindexspace.cc | sed 's/^moindexspace.o/moindexspace.lo moindexspace.d/g' >
moindexspace.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
ri_basis.cc | sed 's/^ri_basis.o/ri_basis.lo ri_basis.d/g' > ri_basis.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
multipole_ints.cc | sed 's/^multipole_ints.o/multipole_ints.lo
multipole_ints.d/g' > multipole_ints.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
mp2r12_energy.cc | sed 's/^mp2r12_energy.o/mp2r12_energy.lo mp2r12_energy.d/g'
> mp2r12_energy.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
compute_energy_a.cc | sed 's/^compute_energy_a.o/compute_energy_a.lo
compute_energy_a.d/g' > compute_energy_a.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
vxb_eval_info.cc | sed 's/^vxb_eval_info.o/vxb_eval_info.lo vxb_eval_info.d/g'
> vxb_eval_info.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
r12ia_node0file.cc | sed 's/^r12ia_node0file.o/r12ia_node0file.lo
r12ia_node0file.d/g' > r12ia_node0file.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
r12ia_memgrp.cc | sed 's/^r12ia_memgrp.o/r12ia_memgrp.lo r12ia_memgrp.d/g' >
r12ia_memgrp.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
r12ia.cc | sed 's/^r12ia.o/r12ia.lo r12ia.d/g' > r12ia.d
mpic++ -M -c -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2
mbptr12.cc | sed 's/^mbptr12.o/mbptr12.lo mbptr12.d/g' > mbptr12.d
/bin/sh ../../../../../libtool --mode=compile mpic++ -DHAVE_CONFIG_H
-D_REENTRANT -I../../../../../src/lib -I/<<PKGBUILDDIR>>/include
-I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2 -c mbptr12.cc -o mbptr12.lo
libtool: compile: mpic++ -DHAVE_CONFIG_H -D_REENTRANT -I../../../../../src/lib
-I/<<PKGBUILDDIR>>/include -I/<<PKGBUILDDIR>>/src/lib -I/usr/include/mpi -O2 -c
mbptr12.cc -fPIC -DPIC -o .libs/mbptr12.o
In file included from
../../../../../src/lib/chemistry/qc/mbptr12/transform_factory.h:135,
from
../../../../../src/lib/chemistry/qc/mbptr12/vxb_eval_info.h:44,
from
../../../../../src/lib/chemistry/qc/mbptr12/r12int_eval.h:36,
from ../../../../../src/lib/chemistry/qc/mbptr12/mbptr12.h:46,
from mbptr12.cc:44:
../../../../../src/lib/chemistry/qc/mbptr12/transform_tbint.h:193:95: error:
ISO C++17 does not allow dynamic exception specifications
193 | virtual void check_int_symm(double threshold =
TwoBodyMOIntsTransform::zero_integral) const throw (ProgrammingError) =0;
|
^~~~~
make[6]: ***
[/<<PKGBUILDDIR>>/src/lib/chemistry/qc/mbptr12/../../../../../lib/GlobalRules:177:
mbptr12.lo] Error 1
make[6]: Leaving directory '/<<PKGBUILDDIR>>/src/lib/chemistry/qc/mbptr12'
make[5]: ***
[/<<PKGBUILDDIR>>/src/lib/chemistry/qc/../../../../lib/GlobalSubDirs:5:
default] Error 1
make[5]: Leaving directory '/<<PKGBUILDDIR>>/src/lib/chemistry/qc'
make[4]: *** [/<<PKGBUILDDIR>>/src/lib/chemistry/../../../lib/GlobalSubDirs:5:
default] Error 1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/src/lib/chemistry'
make[3]: *** [/<<PKGBUILDDIR>>/src/lib/../../lib/GlobalSubDirs:5: default]
Error 1
make[3]: Leaving directory '/<<PKGBUILDDIR>>/src/lib'
make[2]: *** [/<<PKGBUILDDIR>>/src/../lib/GlobalSubDirs:5: default] Error 1
make[2]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: *** [/<<PKGBUILDDIR>>/./lib/GlobalSubDirs:5: default] Error 1
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_auto_build: error: make -j1 returned exit code 2
make: *** [debian/rules:7: binary] Error 25
dpkg-buildpackage: error: debian/rules binary subprocess returned exit status 2
--- End Message ---
--- Begin Message ---
Source: mpqc
Source-Version: 2.3.1-22
Done: Michael Banck <mba...@debian.org>
We believe that the bug you reported is fixed in the latest version of
mpqc, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 984...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Michael Banck <mba...@debian.org> (supplier of updated mpqc package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 02 Dec 2022 22:09:13 +0100
Source: mpqc
Architecture: source
Version: 2.3.1-22
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-de...@lists.alioth.debian.org>
Changed-By: Michael Banck <mba...@debian.org>
Closes: 984244
Changes:
mpqc (2.3.1-22) unstable; urgency=medium
.
* debian/patches/g++11_compile_fix.patch: New patch, fixes compile errors
with g++-11 (closes: #984244).
Checksums-Sha1:
078be4c8a7fbdaa3175cae06e9316b12d12ca53e 2262 mpqc_2.3.1-22.dsc
13bacc28d2ab4a8b6faa872767561c2d77b89dc0 31968 mpqc_2.3.1-22.debian.tar.xz
bb4f51b3704fb9990bb87f364bbbd704a71cda44 6204 mpqc_2.3.1-22_source.buildinfo
Checksums-Sha256:
642b861fde5db79d7c3f05115cb53926a9cb90b90667a10cb7cf5db039a41a7d 2262
mpqc_2.3.1-22.dsc
14e6c95fa5586cea019b783873205dc5652b50e87cfd6fbf0e30d265907cce5f 31968
mpqc_2.3.1-22.debian.tar.xz
1424c840f4de8eaaaf9924aa7ca7eb6b1c097bf54d43e657dc57a6154f499c1b 6204
mpqc_2.3.1-22_source.buildinfo
Files:
81bc0fc47534299474a60784665b5ec3 2262 science optional mpqc_2.3.1-22.dsc
259a626be14109bb85f1d263269eca35 31968 science optional
mpqc_2.3.1-22.debian.tar.xz
870ce3547e272a8064e50b1697cdea89 6204 science optional
mpqc_2.3.1-22_source.buildinfo
-----BEGIN PGP SIGNATURE-----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=iJQt
-----END PGP SIGNATURE-----
--- End Message ---