Your message dated Sat, 05 Nov 2022 22:57:30 +0000 with message-id <[email protected]> and subject line Bug#1011662: fixed in salmon 1.9.0+ds1-1 has caused the Debian Bug report #1011662, regarding salmon: FTBFS with onetbb/2021.5.0-8 in experimental to be marked as done.
This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact [email protected] immediately.) -- 1011662: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1011662 Debian Bug Tracking System Contact [email protected] with problems
--- Begin Message ---Source: salmon Version: 1.6.0+ds1-1 Severity: normal Tags: ftbfs Hello, tbb/onetbb transition (#1007222) is currently in the planning. During test rebuild of libtbb-dev reverse dependencies with onetbb/2021.5.0-8 in experimental, current source failed to build with the following: [ 4%] Building CXX object external/pufferfish/external/twopaco/graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o cd /<<PKGBUILDDIR>>/obj-x86_64-linux-gnu/external/pufferfish/external/twopaco/graphdump && /usr/bin/c++ -I/<<PKGBUILDDIR>>/external/pufferfish/external/twopaco/graphdump/../common -I/<<PKGBUILDDIR>>/external/pu fferfish/external/twopaco/graphdump/. -g -O2 -ffile-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -DNDEBUG -std=c++14 -MD -MT externa l/pufferfish/external/twopaco/graphdump/CMakeFiles/graphdump.dir/graphdump.cpp.o -MF CMakeFiles/graphdump.dir/graphdump.cpp.o.d -o CMakeFiles/graphdump.dir/graphdump.cpp.o -c /<<PKGBUILDDIR>>/external/pufferfish /external/twopaco/graphdump/graphdump.cpp In file included from /<<PKGBUILDDIR>>/external/pufferfish/external/twopaco/graphdump/graphdump.cpp:18: /<<PKGBUILDDIR>>/external/pufferfish/external/twopaco/graphdump/../common/streamfastaparser.h:8:10: fatal error: tbb/mutex.h: No such file or directory 8 | #include <tbb/mutex.h> | ^~~~~~~~~~~~~ compilation terminated. Andrius
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--- Begin Message ---Source: salmon Source-Version: 1.9.0+ds1-1 Done: Étienne Mollier <[email protected]> We believe that the bug you reported is fixed in the latest version of salmon, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to [email protected], and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Étienne Mollier <[email protected]> (supplier of updated salmon package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing [email protected]) -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Sat, 05 Nov 2022 20:45:44 +0100 Source: salmon Architecture: source Version: 1.9.0+ds1-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <[email protected]> Changed-By: Étienne Mollier <[email protected]> Closes: 1008252 1008254 1011662 Changes: salmon (1.9.0+ds1-1) unstable; urgency=medium . [ Andreas Tille ] * Team upload. * New upstream version (Closes: #1008254) . [ Étienne Mollier ] * Standards-Version: 4.6.1 (routine-update) * Refresh use_debian_packaged_libs.patch, disable-version-check.patch and spelling patch. * d/external/: bump pufferfish version to support onetbb. (Closes: #1011662) * d/external/: update twopaco to fix ftbfs with onetbb. * d/external/install/: update to reflect changes in embedded pufferfish. * Unvendor embedded cereal in embedded pufferfish. (Closes: #1008252) * verbose-test.patch: make test failures more verbose. * d/salsa-ci.yml: disable run on i386 Checksums-Sha1: 18ff46414bf46e49145d509e691cd72c15fa84ff 2673 salmon_1.9.0+ds1-1.dsc 2dcc5d628c132436a7cae0508f412894f4029529 5715676 salmon_1.9.0+ds1.orig.tar.xz e9bcfd03c0fc89aff8a950a34731a60211e6a068 1300464 salmon_1.9.0+ds1-1.debian.tar.xz Checksums-Sha256: 3c6b68cf0fe0e6e2915e1a8734d18490414692692449b0c91e93ac85fb229a37 2673 salmon_1.9.0+ds1-1.dsc 7ab756d2d70c73bc7ce70cc2695ac0e1083f1cf55d8dfbe09d6d6e4fe1f80833 5715676 salmon_1.9.0+ds1.orig.tar.xz d724200d4e2dee36973f04af7f4682d3fbc02cdab85b04bc175bb3d1705c68df 1300464 salmon_1.9.0+ds1-1.debian.tar.xz Files: ca142a2c617fc85f7a81f54db7ff1b46 2673 science optional salmon_1.9.0+ds1-1.dsc d1963ac786816a289e9dc587b59d3b58 5715676 science optional salmon_1.9.0+ds1.orig.tar.xz 5ce692353df193d54831468c95326f2e 1300464 science optional salmon_1.9.0+ds1-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmNm4rYUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrBThAAx4UZu1nw52tApHln/n2N0hjcLDpF oNimhlaXQDEE3sQzIi5p7Yz7zS1asjmr8YESUbKoJkIy3keMOmJlJ4pR/kkTrVn/ qOt6pSaPYwRBDZSTAiJurgK/NFyL0BAnhyTUnWFNrzbVxirUqKwdW1G/xEJRxEyn Px/UZYxRlwQ6XYO9+uK1QVQwZcpEhS5fLMxC+N0WWr+HN4sgFZSA2KbBP9O68mAP PDIxJJ+na+lR/GLQdBkeYffZm6FzefSKasgp6tITZ+BcAeR63Oq3B0GP9JJBuddY pkPIspHrWG1XaAYDZK0VNNPFpp6S8aya+rXvUDpOtymB0oo8kLtCm+kT/HzxKvL2 joXItKP5HKCb6BtRG6NHROG/zONG2scL1Br3S5zXQpqY4fkiUlFKcIkAZYkB99/2 M/du8nE4203PcW8y6qNMe7+aRu++1tS13/2/hFVuFIGfZNNciiQdWTtfisgbkQC0 VDZbqcjm/aurCnGrIl3ifryBxqSapR6WMwFqUedP9A+0Zx8r/Hc0hK5Q0jAneDH8 CCF9nmAwYhWeimSDAKL/OREgkVFZuv1M+MFV1hb5u+modxBBIlJLMR0O1jBPj6Ii EpRhI8m248LpMsXiow6MSKhLsVLAU0Y1i1m6zCP/cBxtWyVMZNQqO+Vfl7DBwfvo RLgjB/BHgm/dE0M= =3kc+ -----END PGP SIGNATURE-----
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