Source: rmatrix, r-cran-glmmtmb Control: found -1 rmatrix/1.3-0-1 Control: found -1 r-cran-glmmtmb/1.0.2.1-1 Severity: serious Tags: sid bullseye X-Debbugs-CC: debian...@lists.debian.org User: debian...@lists.debian.org Usertags: breaks needs-update
Hi Maintainers The upload of rmatrix/1.3-0-1 caused the autopkgtest of r-cran-glmmtmb on s390x to fail. Unfortunately, gating of autopkgtest failures was not yet enabled on s390x at the time, and this failure has now made it into testing [2]. I've copied what I hope is the relevant part of the log below. More information about this bug and the reason for filing it can be found on https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation Regards Graham [1] https://ci.debian.net/packages/r/r-cran-glmmtmb/unstable/s390x/ [2] https://ci.debian.net/packages/r/r-cran-glmmtmb/testing/s390x/ == Failed ====================================================================== -- 1. Error (test-VarCorr.R:11:1): (code run outside of `test_that()`) --------- Error: gradient function must return a numeric vector of length 6 Backtrace: 1. glmmTMB::glmmTMB(distance ~ age + (age | Subject), data = Orthodont) test-VarCorr.R:11:0 2. glmmTMB::fitTMB(TMBStruc) 4. glmmTMB:::optfun() 6. base::with.default(...) 7. [ base::eval(...) ] with 1 more call -- 2. Error (test-basics.R:29:1): (code run outside of `test_that()`) ---------- Error: gradient function must return a numeric vector of length 3 Backtrace: 1. glmmTMB::glmmTMB(Reaction ~ 1 + (1 | Subject), sleepstudy) test-basics.R:29:0 2. glmmTMB::fitTMB(TMBStruc) 4. glmmTMB:::optfun() 6. base::with.default(...) 7. [ base::eval(...) ] with 1 more call -- 3. Error (test-bootMer.R:11:5): Bernoulli responses ------------------------- Error: gradient function must return a numeric vector of length 3 Backtrace: 1. glmmTMB::glmmTMB(...) test-bootMer.R:11:4 2. glmmTMB::fitTMB(TMBStruc) 4. glmmTMB:::optfun() 6. base::with.default(...) 7. [ base::eval(...) ] with 1 more call -- 4. Error (test-bootMer.R:19:5): Bernoulli responses ------------------------- Error: gradient function must return a numeric vector of length 3 Backtrace: 1. glmmTMB::glmmTMB(...) test-bootMer.R:19:4 2. glmmTMB::fitTMB(TMBStruc) 4. glmmTMB:::optfun() 6. base::with.default(...) 7. [ base::eval(...) ] with 1 more call -- 5. Error (test-control.R:26:5): profile method ------------------------------ Error: gradient function must return a numeric vector of length 15 Backtrace: 1. glmmTMB:::myfit(profile = FALSE) test-control.R:26:4 2. glmmTMB::glmmTMB(...) test-control.R:20:8 3. glmmTMB::fitTMB(TMBStruc) 5. glmmTMB:::optfun() 7. base::with.default(...) 8. [ base::eval(...) ] with 1 more call -- 6. Error (test-control.R:71:3): parallel regions ---------------------------- Error: gradient function must return a numeric vector of length 15 Backtrace: 1. glmmTMB:::capture_time_model(parallel = 1) test-control.R:71:2 2. glmmTMB:::myfit(...) test-control.R:64:4 3. glmmTMB::glmmTMB(...) test-control.R:54:4 4. glmmTMB::fitTMB(TMBStruc) 6. glmmTMB:::optfun() 8. base::with.default(...) 9. [ base::eval(...) ] with 1 more call -- 7. Error (test-disp.R:33:1): (code run outside of `test_that()`) ------------ Error: gradient function must return a numeric vector of length 5 Backtrace: 1. glmmTMB::glmmTMB(x ~ disp + (1 | fac), dispformula = ~disp, dat) test-disp.R:33:0 2. glmmTMB::fitTMB(TMBStruc) 4. glmmTMB:::optfun() 6. base::with.default(...) 7. [ base::eval(...) ] with 1 more call -- 8. Error (test-edgecases.R:9:5): profiling failure -------------------------- Error: gradient function must return a numeric vector of length 3 Backtrace: 1. testthat::expect_warning(...) test-edgecases.R:9:4 6. glmmTMB::glmmTMB(...) 7. glmmTMB::fitTMB(TMBStruc) 9. glmmTMB:::optfun() 11. base::with.default(...) 12. [ base::eval(...) ] with 1 more call -- 9. Error (test-env.R:18:5): basic example #1 -------------------------------- Error: gradient function must return a numeric vector of length 4 Backtrace: 1. glmmTMB::glmmTMB(Reaction ~ Days + (1 | Subject), data = sleepstudy) test-env.R:18:4 2. glmmTMB::fitTMB(TMBStruc) 4. glmmTMB:::optfun() 6. base::with.default(...) 7. [ base::eval(...) ] with 1 more call -- 10. Error (test-env.R:34:5): paranoia --------------------------------------- Error: gradient function must return a numeric vector of length 4 Backtrace: 1. glmmTMB::glmmTMB(Reaction ~ Days + (1 | Subject), data = sleepstudy) test-env.R:34:4 2. glmmTMB::fitTMB(TMBStruc) 4. glmmTMB:::optfun() 6. base::with.default(...) 7. [ base::eval(...) ] with 1 more call ... and 20 more Maximum number of 10 failures reached, some test results may be missing.
